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Details
Link-It Detail - Jax Mouse Phenotype - abnormal T cell receptor V(D)J recombination
Debug Stats
  • ### Total Build Time: 77 ms 76.684 KB
  • CONCEPT_NAME gt=6 ms Completed: 6 ms rowSize= 416 bytes
  • CONCEPT_SOLR_HIT_STATS gt=0 Completed: 0 ms rowSize= 14 bytes
  • CONCEPT_DEFINITION gt=0 Completed: 0 ms rowSize= 314 bytes
  • CONCEPT_SYNONYM gt=0 Completed: 0 ms rowSize= 200 bytes
  • Skipping details on: CONCEPT_TEXT gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_SEMANTIC_TYPE gt=1 ms Completed: 1 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_NAMESPACE gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_PARENTS gt=7 ms Completed: 7 ms rowSize= 586 bytes
  • CONCEPT_CHILDREN gt=6 ms Completed: 6 ms rowSize= 2.039 KB
  • CONCEPT_ANCESTRAL_ROOTS gt=0 Completed: 0 ms rowSize= 9.648 KB
  • CONCEPT_RELATIONSHIPS gt=2 ms Completed: 2 ms rowSize= 106 bytes
  • CONCEPT_GENES gt=48 ms Completed: 48 ms rowSize= 62.189 KB
  • CONCEPT_XREFS gt=6 ms Completed: 6 ms rowSize= 1.182 KB
  • CONCEPT_ANCILLARY gt=1 ms Completed: 1 ms rowSize= 14 bytes
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Jax Mouse Phenotype (1)
abnormal T cell receptor V(D)J recombination MP:0008754
Definition (1)
any anomaly in the process by which T cell receptor V, D, and J, or V and J gene segments, depending on the specific locus, are recombined within a single locus
Synonyms (1)
"abnormal T cell receptor V-J recombination" EXACT
Parents (1)
img abnormal T cell differentiation MP:0002145
Children (4)
img abnormal T cell receptor gamma chain V-J recombination MP:0008757
img abnormal T cell receptor delta chain V(D)J recombination MP:0008759
img abnormal T cell receptor alpha chain V-J recombination MP:0008756
img abnormal T cell receptor beta chain V(D)J recombination MP:0008758
Ancestral Roots
RootRoot Plus OneDepthParent
img mammalian phenotype MP:0000001img immune system phenotype MP:000538710img abnormal T cell differentiation MP:0002145
img mammalian phenotype MP:0000001img hematopoietic system phenotype MP:000539711img abnormal T cell differentiation MP:0002145
img mammalian phenotype MP:0000001img hematopoietic system phenotype MP:000539710img abnormal T cell differentiation MP:0002145
img mammalian phenotype MP:0000001img immune system phenotype MP:00053879img abnormal T cell differentiation MP:0002145
img mammalian phenotype MP:0000001img cellular phenotype MP:00053848img abnormal T cell differentiation MP:0002145
img mammalian phenotype MP:0000001img hematopoietic system phenotype MP:00053979img abnormal T cell differentiation MP:0002145
img mammalian phenotype MP:0000001img immune system phenotype MP:00053878img abnormal T cell differentiation MP:0002145
Genes (11)

Species:
human : 11
SpeciesGeneGeneIdGene NameEvidence
HumanNHEJ179840nonhomologous end-joining factor 1
img Jax MP, Pubmed Id: 1547488, MOUSE PHENOTYPE ID: MGI:97848
img Jax MP, Pubmed Id: 19126872, MOUSE PHENOTYPE ID: MGI:97848
img Jax MP, Pubmed Id: 22084409, MOUSE PHENOTYPE ID: MGI:1889272
img Jax MP, Pubmed Id: 20133615, MOUSE PHENOTYPE ID: MGI:1335098
img Jax MP, Pubmed Id: 1547487, MOUSE PHENOTYPE ID: MGI:97849
img Jax MP, Pubmed Id: 9584189, MOUSE PHENOTYPE ID: MGI:2665122
img Jax MP, Pubmed Id: 18354198, MOUSE PHENOTYPE ID: MGI:104735
img Jax MP, Pubmed Id: 23207905, MOUSE PHENOTYPE ID: MGI:1922820
img Jax MP, Pubmed Id: 9768756, MOUSE PHENOTYPE ID: MGI:104779
img Jax MP, Pubmed Id: 23207905, MOUSE PHENOTYPE ID: MGI:2441769
img Jax MP, Pubmed Id: 23207905, MOUSE PHENOTYPE ID: MGI:1922820
HumanBCL11B64919B-cell CLL/lymphoma 11B (zinc finger protein)
INFERRED
HumanDCLRE1C64421DNA cross-link repair 1C
img Jax MP, Pubmed Id: 23207905, MOUSE PHENOTYPE ID: MGI:2441769
img Jax MP, Pubmed Id: 23207905, MOUSE PHENOTYPE ID: MGI:1922820
img Jax MP, Pubmed Id: 23207905, MOUSE PHENOTYPE ID: MGI:1922820
img Jax MP, Pubmed Id: 19126872, MOUSE PHENOTYPE ID: MGI:97848
img Jax MP, Pubmed Id: 20133615, MOUSE PHENOTYPE ID: MGI:1335098
img Jax MP, Pubmed Id: 9768756, MOUSE PHENOTYPE ID: MGI:104779
img Jax MP, Pubmed Id: 18354198, MOUSE PHENOTYPE ID: MGI:104735
img Jax MP, Pubmed Id: 1547488, MOUSE PHENOTYPE ID: MGI:97848
img Jax MP, Pubmed Id: 22084409, MOUSE PHENOTYPE ID: MGI:1889272
img Jax MP, Pubmed Id: 1547487, MOUSE PHENOTYPE ID: MGI:97849
img Jax MP, Pubmed Id: 9584189, MOUSE PHENOTYPE ID: MGI:2665122
HumanLAT27040linker for activation of T cells
INFERRED
HumanCADM123705cell adhesion molecule 1
img Jax MP, Pubmed Id: 18354198, MOUSE PHENOTYPE ID: MGI:104735
img Jax MP, Pubmed Id: 1547487, MOUSE PHENOTYPE ID: MGI:97849
img Jax MP, Pubmed Id: 22084409, MOUSE PHENOTYPE ID: MGI:1889272
img Jax MP, Pubmed Id: 20133615, MOUSE PHENOTYPE ID: MGI:1335098
img Jax MP, Pubmed Id: 23207905, MOUSE PHENOTYPE ID: MGI:2441769
img Jax MP, Pubmed Id: 9768756, MOUSE PHENOTYPE ID: MGI:104779
img Jax MP, Pubmed Id: 1547488, MOUSE PHENOTYPE ID: MGI:97848
img Jax MP, Pubmed Id: 9584189, MOUSE PHENOTYPE ID: MGI:2665122
img Jax MP, Pubmed Id: 23207905, MOUSE PHENOTYPE ID: MGI:1922820
img Jax MP, Pubmed Id: 19126872, MOUSE PHENOTYPE ID: MGI:97848
img Jax MP, Pubmed Id: 23207905, MOUSE PHENOTYPE ID: MGI:1922820
HumanRAG25897recombination activating gene 2
img Jax MP, Pubmed Id: 1547488, MOUSE PHENOTYPE ID: MGI:97848
img Jax MP, Pubmed Id: 22084409, MOUSE PHENOTYPE ID: MGI:1889272
img Jax MP, Pubmed Id: 23207905, MOUSE PHENOTYPE ID: MGI:1922820
img Jax MP, Pubmed Id: 20133615, MOUSE PHENOTYPE ID: MGI:1335098
img Jax MP, Pubmed Id: 9584189, MOUSE PHENOTYPE ID: MGI:2665122
img Jax MP, Pubmed Id: 23207905, MOUSE PHENOTYPE ID: MGI:1922820
img Jax MP, Pubmed Id: 19126872, MOUSE PHENOTYPE ID: MGI:97848
img Jax MP, Pubmed Id: 23207905, MOUSE PHENOTYPE ID: MGI:2441769
img Jax MP, Pubmed Id: 18354198, MOUSE PHENOTYPE ID: MGI:104735
img Jax MP, Pubmed Id: 9768756, MOUSE PHENOTYPE ID: MGI:104779
img Jax MP, Pubmed Id: 1547487, MOUSE PHENOTYPE ID: MGI:97849
HumanRAG15896recombination activating gene 1
img Jax MP, Pubmed Id: 18354198, MOUSE PHENOTYPE ID: MGI:104735
img Jax MP, Pubmed Id: 1547488, MOUSE PHENOTYPE ID: MGI:97848
img Jax MP, Pubmed Id: 22084409, MOUSE PHENOTYPE ID: MGI:1889272
img Jax MP, Pubmed Id: 23207905, MOUSE PHENOTYPE ID: MGI:1922820
img Jax MP, Pubmed Id: 9768756, MOUSE PHENOTYPE ID: MGI:104779
img Jax MP, Pubmed Id: 19126872, MOUSE PHENOTYPE ID: MGI:97848
img Jax MP, Pubmed Id: 23207905, MOUSE PHENOTYPE ID: MGI:2441769
img Jax MP, Pubmed Id: 9584189, MOUSE PHENOTYPE ID: MGI:2665122
img Jax MP, Pubmed Id: 1547487, MOUSE PHENOTYPE ID: MGI:97849
img Jax MP, Pubmed Id: 20133615, MOUSE PHENOTYPE ID: MGI:1335098
img Jax MP, Pubmed Id: 23207905, MOUSE PHENOTYPE ID: MGI:1922820
HumanPRKDC5591protein kinase, DNA-activated, catalytic polypeptide
img Jax MP, Pubmed Id: 23207905, MOUSE PHENOTYPE ID: MGI:1922820
img Jax MP, Pubmed Id: 1547487, MOUSE PHENOTYPE ID: MGI:97849
img Jax MP, Pubmed Id: 23207905, MOUSE PHENOTYPE ID: MGI:1922820
img Jax MP, Pubmed Id: 18354198, MOUSE PHENOTYPE ID: MGI:104735
img Jax MP, Pubmed Id: 9584189, MOUSE PHENOTYPE ID: MGI:2665122
img Jax MP, Pubmed Id: 1547488, MOUSE PHENOTYPE ID: MGI:97848
img Jax MP, Pubmed Id: 23207905, MOUSE PHENOTYPE ID: MGI:2441769
img Jax MP, Pubmed Id: 19126872, MOUSE PHENOTYPE ID: MGI:97848
img Jax MP, Pubmed Id: 22084409, MOUSE PHENOTYPE ID: MGI:1889272
img Jax MP, Pubmed Id: 9768756, MOUSE PHENOTYPE ID: MGI:104779
img Jax MP, Pubmed Id: 20133615, MOUSE PHENOTYPE ID: MGI:1335098
HumanMYC4609v-myc avian myelocytomatosis viral oncogene homolog
INFERRED
HumanLIG43981ligase IV, DNA, ATP-dependent
img Jax MP, Pubmed Id: 18354198, MOUSE PHENOTYPE ID: MGI:104735
img Jax MP, Pubmed Id: 20133615, MOUSE PHENOTYPE ID: MGI:1335098
img Jax MP, Pubmed Id: 23207905, MOUSE PHENOTYPE ID: MGI:1922820
img Jax MP, Pubmed Id: 22084409, MOUSE PHENOTYPE ID: MGI:1889272
img Jax MP, Pubmed Id: 19126872, MOUSE PHENOTYPE ID: MGI:97848
img Jax MP, Pubmed Id: 1547488, MOUSE PHENOTYPE ID: MGI:97848
img Jax MP, Pubmed Id: 23207905, MOUSE PHENOTYPE ID: MGI:2441769
img Jax MP, Pubmed Id: 1547487, MOUSE PHENOTYPE ID: MGI:97849
img Jax MP, Pubmed Id: 23207905, MOUSE PHENOTYPE ID: MGI:1922820
img Jax MP, Pubmed Id: 9768756, MOUSE PHENOTYPE ID: MGI:104779
img Jax MP, Pubmed Id: 9584189, MOUSE PHENOTYPE ID: MGI:2665122
HumanCPA31359carboxypeptidase A3 (mast cell)
INFERRED
XRefs (1)

XRef Types:
mp : 1


ToppGene Datasets:
none : 1
ToppGene DatasetsXRef TypeXRef IdXRefValuesSourceTop % Rank
MPimg MP:0008754abnormal T cell receptor V(D)J recombination0self