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Details
Link-It Detail - Jax Mouse Phenotype - abnormal alpha-beta intraepithelial T cell morphology
Debug Stats
  • ### Total Build Time: 40 ms 57.718 KB
  • CONCEPT_NAME gt=3 ms Completed: 3 ms rowSize= 434 bytes
  • CONCEPT_SOLR_HIT_STATS gt=0 Completed: 0 ms rowSize= 14 bytes
  • CONCEPT_DEFINITION gt=0 Completed: 0 ms rowSize= 363 bytes
  • CONCEPT_SYNONYM gt=0 Completed: 0 ms rowSize= 211 bytes
  • Skipping details on: CONCEPT_TEXT gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_SEMANTIC_TYPE gt=0 Completed: 0 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_NAMESPACE gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_PARENTS gt=0 Completed: 0 ms rowSize= 1.044 KB
  • CONCEPT_CHILDREN gt=7 ms Completed: 7 ms rowSize= 1.102 KB
  • CONCEPT_ANCESTRAL_ROOTS gt=1 ms Completed: 1 ms rowSize= 8.364 KB
  • CONCEPT_RELATIONSHIPS gt=1 ms Completed: 1 ms rowSize= 106 bytes
  • CONCEPT_GENES gt=27 ms Completed: 27 ms rowSize= 44.889 KB
  • CONCEPT_XREFS gt=1 ms Completed: 1 ms rowSize= 1.190 KB
  • CONCEPT_ANCILLARY gt=0 Completed: 0 ms rowSize= 14 bytes
  • Reload Stats
Jax Mouse Phenotype (1)
abnormal alpha-beta intraepithelial T cell morphology MP:0008399
Definition (1)
any structural anomaly of a alpha-beta T cell present in columnar epithelia such as in the gastrointestinal tract; intraepithelial T cells often have distinct developmental pathways and activation requirements
Synonyms (1)
"abnormal alpha-beta intraepithelial T-cell morphology" EXACT
Parents (2)
img abnormal effector T cell morphology MP:0002435
img abnormal intraepithelial T cell morphology MP:0008894
Children (2)
img abnormal CD8 positive, alpha-beta intraepithelial T cell morphology MP:0008401
img abnormal CD4-positive, alpha-beta intraepithelial T cell morphology MP:0008400
Ancestral Roots
RootRoot Plus OneDepthParent
img mammalian phenotype MP:0000001img immune system phenotype MP:000538710img abnormal effector T cell morphology MP:0002435
img mammalian phenotype MP:0000001img hematopoietic system phenotype MP:000539711img abnormal effector T cell morphology MP:0002435
img mammalian phenotype MP:0000001img hematopoietic system phenotype MP:000539710img abnormal effector T cell morphology MP:0002435
img mammalian phenotype MP:0000001img immune system phenotype MP:000538710img abnormal intraepithelial T cell morphology MP:0008894
img mammalian phenotype MP:0000001img hematopoietic system phenotype MP:000539711img abnormal intraepithelial T cell morphology MP:0008894
img mammalian phenotype MP:0000001img hematopoietic system phenotype MP:000539710img abnormal intraepithelial T cell morphology MP:0008894
Genes (11)

Species:
human : 11
SpeciesGeneGeneIdGene NameEvidence
HumanTNF7124tumor necrosis factor
img Jax MP, Pubmed Id: 12928364, MOUSE PHENOTYPE ID: MGI:1333797
img Jax MP, Pubmed Id: 8223445, MOUSE PHENOTYPE ID: MGI:88334
img Jax MP, Pubmed Id: 9045930, MOUSE PHENOTYPE ID: MGI:96756
img Jax MP, Pubmed Id: 18439426, MOUSE PHENOTYPE ID: MGI:104798
img Jax MP, Pubmed Id: 18439426, MOUSE PHENOTYPE ID: MGI:104798
img Jax MP, Pubmed Id: 7831294, MOUSE PHENOTYPE ID: MGI:96551
img Jax MP, Pubmed Id: 9045930, MOUSE PHENOTYPE ID: MGI:95602
img Jax MP, Pubmed Id: 7831294, MOUSE PHENOTYPE ID: MGI:96551
img Jax MP, Pubmed Id: 18439426, MOUSE PHENOTYPE ID: MGI:104798
HumanRORC6097RAR-related orphan receptor C
INFERRED
HumanPTPRC5788protein tyrosine phosphatase, receptor type, C
INFERRED
HumanPIGR5284polymeric immunoglobulin receptor
INFERRED
HumanABCB15243ATP-binding cassette, sub-family B (MDR/TAP), member 1
INFERRED
HumanLCK3932lymphocyte-specific protein tyrosine kinase
img Jax MP, Pubmed Id: 18439426, MOUSE PHENOTYPE ID: MGI:104798
img Jax MP, Pubmed Id: 18439426, MOUSE PHENOTYPE ID: MGI:104798
img Jax MP, Pubmed Id: 9045930, MOUSE PHENOTYPE ID: MGI:96756
img Jax MP, Pubmed Id: 7831294, MOUSE PHENOTYPE ID: MGI:96551
img Jax MP, Pubmed Id: 8223445, MOUSE PHENOTYPE ID: MGI:88334
img Jax MP, Pubmed Id: 12928364, MOUSE PHENOTYPE ID: MGI:1333797
img Jax MP, Pubmed Id: 18439426, MOUSE PHENOTYPE ID: MGI:104798
img Jax MP, Pubmed Id: 9045930, MOUSE PHENOTYPE ID: MGI:95602
img Jax MP, Pubmed Id: 7831294, MOUSE PHENOTYPE ID: MGI:96551
HumanIL2RG3561interleukin 2 receptor, gamma
img Jax MP, Pubmed Id: 9045930, MOUSE PHENOTYPE ID: MGI:96756
img Jax MP, Pubmed Id: 9045930, MOUSE PHENOTYPE ID: MGI:95602
img Jax MP, Pubmed Id: 7831294, MOUSE PHENOTYPE ID: MGI:96551
img Jax MP, Pubmed Id: 18439426, MOUSE PHENOTYPE ID: MGI:104798
img Jax MP, Pubmed Id: 7831294, MOUSE PHENOTYPE ID: MGI:96551
img Jax MP, Pubmed Id: 18439426, MOUSE PHENOTYPE ID: MGI:104798
img Jax MP, Pubmed Id: 8223445, MOUSE PHENOTYPE ID: MGI:88334
img Jax MP, Pubmed Id: 12928364, MOUSE PHENOTYPE ID: MGI:1333797
img Jax MP, Pubmed Id: 18439426, MOUSE PHENOTYPE ID: MGI:104798
HumanFYN2534FYN oncogene related to SRC, FGR, YES
img Jax MP, Pubmed Id: 7831294, MOUSE PHENOTYPE ID: MGI:96551
img Jax MP, Pubmed Id: 9045930, MOUSE PHENOTYPE ID: MGI:95602
img Jax MP, Pubmed Id: 12928364, MOUSE PHENOTYPE ID: MGI:1333797
img Jax MP, Pubmed Id: 7831294, MOUSE PHENOTYPE ID: MGI:96551
img Jax MP, Pubmed Id: 18439426, MOUSE PHENOTYPE ID: MGI:104798
img Jax MP, Pubmed Id: 18439426, MOUSE PHENOTYPE ID: MGI:104798
img Jax MP, Pubmed Id: 8223445, MOUSE PHENOTYPE ID: MGI:88334
img Jax MP, Pubmed Id: 18439426, MOUSE PHENOTYPE ID: MGI:104798
img Jax MP, Pubmed Id: 9045930, MOUSE PHENOTYPE ID: MGI:96756
HumanCCR61235chemokine (C-C motif) receptor 6
img Jax MP, Pubmed Id: 12928364, MOUSE PHENOTYPE ID: MGI:1333797
img Jax MP, Pubmed Id: 18439426, MOUSE PHENOTYPE ID: MGI:104798
img Jax MP, Pubmed Id: 9045930, MOUSE PHENOTYPE ID: MGI:96756
img Jax MP, Pubmed Id: 18439426, MOUSE PHENOTYPE ID: MGI:104798
img Jax MP, Pubmed Id: 8223445, MOUSE PHENOTYPE ID: MGI:88334
img Jax MP, Pubmed Id: 7831294, MOUSE PHENOTYPE ID: MGI:96551
img Jax MP, Pubmed Id: 7831294, MOUSE PHENOTYPE ID: MGI:96551
img Jax MP, Pubmed Id: 9045930, MOUSE PHENOTYPE ID: MGI:95602
img Jax MP, Pubmed Id: 18439426, MOUSE PHENOTYPE ID: MGI:104798
HumanCD247919CD247 molecule
img Jax MP, Pubmed Id: 12928364, MOUSE PHENOTYPE ID: MGI:1333797
img Jax MP, Pubmed Id: 18439426, MOUSE PHENOTYPE ID: MGI:104798
img Jax MP, Pubmed Id: 7831294, MOUSE PHENOTYPE ID: MGI:96551
img Jax MP, Pubmed Id: 18439426, MOUSE PHENOTYPE ID: MGI:104798
img Jax MP, Pubmed Id: 8223445, MOUSE PHENOTYPE ID: MGI:88334
img Jax MP, Pubmed Id: 9045930, MOUSE PHENOTYPE ID: MGI:95602
img Jax MP, Pubmed Id: 18439426, MOUSE PHENOTYPE ID: MGI:104798
img Jax MP, Pubmed Id: 9045930, MOUSE PHENOTYPE ID: MGI:96756
img Jax MP, Pubmed Id: 7831294, MOUSE PHENOTYPE ID: MGI:96551
HumanB2M567beta-2-microglobulin
INFERRED
XRefs (1)

XRef Types:
mp : 1


ToppGene Datasets:
none : 1
ToppGene DatasetsXRef TypeXRef IdXRefValuesSourceTop % Rank
MPimg MP:0008399abnormal alpha-beta intraepithelial T cell morphology0self