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Details
Link-It Detail - Jax Mouse Phenotype - abnormal DNA repair
Debug Stats
  • ### Total Build Time: 359 ms 23.937 KB
  • CONCEPT_NAME gt=0 Completed: 0 ms rowSize= 366 bytes
  • CONCEPT_SOLR_HIT_STATS gt=0 Completed: 0 ms rowSize= 14 bytes
  • CONCEPT_DEFINITION gt=0 Completed: 0 ms rowSize= 231 bytes
  • Skipping details on: CONCEPT_SYNONYM gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • Skipping details on: CONCEPT_TEXT gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_SEMANTIC_TYPE gt=0 Completed: 0 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_NAMESPACE gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_PARENTS gt=0 Completed: 0 ms rowSize= 1.011 KB
  • CONCEPT_CHILDREN gt=0 Completed: 0 ms rowSize= 1.953 KB
  • CONCEPT_ANCESTRAL_ROOTS gt=0 Completed: 0 ms rowSize= 2.903 KB
  • CONCEPT_RELATIONSHIPS gt=0 Completed: 0 ms rowSize= 106 bytes
  • CONCEPT_GENES gt=354 ms Completed: 354 ms rowSize= 16.185 KB
  • CONCEPT_XREFS gt=5 ms Completed: 5 ms rowSize= 1.157 KB
  • CONCEPT_ANCILLARY gt=0 Completed: 0 ms rowSize= 14 bytes
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Jax Mouse Phenotype (1)
abnormal DNA repair MP:0008058
Definition (1)
any anomaly in the process of restoring DNA after damage or replication error
Parents (2)
img abnormal cell physiology MP:0005621
img abnormal metabolism MP:0005266
Children (4)
img abnormal base-excision repair MP:0009796
img abnormal single-strand DNA break repair MP:0010947
img abnormal mismatch repair MP:0009797
img abnormal double-strand DNA break repair MP:0010948
Ancestral Roots
RootRoot Plus OneDepthParent
img mammalian phenotype MP:0000001img cellular phenotype MP:00053844img abnormal cell physiology MP:0005621
img mammalian phenotype MP:0000001img homeostasis/metabolism phenotype MP:00053764img abnormal metabolism MP:0005266
Genes (77)

Species:
human : 77
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Current 25
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Current 1
SpeciesGeneGeneIdGene NameEvidence
HumanRAD21L1642636RAD21-like 1 (S. pombe)
INFERRED
HumanSETD8387893SET domain containing (lysine methyltransferase) 8
Click here to display 61 evidence detail records.
HumanALKBH3221120alkB, alkylation repair homolog 3 (E. coli)
Click here to display 61 evidence detail records.
HumanAPLF200558aprataxin and PNKP like factor
Click here to display 61 evidence detail records.
HumanGGN199720gametogenetin
INFERRED
HumanM1AP130951meiosis 1 associated protein
INFERRED
HumanALKBH2121642alkB, alkylation repair homolog 2 (E. coli)
Click here to display 61 evidence detail records.
HumanSYCE193426synaptonemal complex central element protein 1
INFERRED
HumanSUV420H284787suppressor of variegation 4-20 homolog 2 (Drosophila)
Click here to display 61 evidence detail records.
HumanSPATA2284690spermatogenesis associated 22
INFERRED
HumanMCM884515minichromosome maintenance complex component 8
INFERRED
HumanHORMAD184072HORMA domain containing 1
INFERRED
HumanCTC180169CTS telomere maintenance complex component 1
Click here to display 61 evidence detail records.
HumanATAD579915ATPase family, AAA domain containing 5
Click here to display 61 evidence detail records.
HumanNHEJ179840nonhomologous end-joining factor 1
Click here to display 61 evidence detail records.
HumanPRDM956979PR domain containing 9
INFERRED
HumanTEX1556154testis expressed 15
INFERRED
HumanTDP155775tyrosyl-DNA phosphodiesterase 1
Click here to display 61 evidence detail records.
HumanNEIL355247nei endonuclease VIII-like 3 (E. coli)
Click here to display 61 evidence detail records.
HumanRIF155183RAP1 interacting factor homolog (yeast)
Click here to display 61 evidence detail records.
HumanAPTX54840aprataxin
Click here to display 61 evidence detail records.
HumanUIMC151720ubiquitin interaction motif containing 1
Click here to display 61 evidence detail records.
HumanZC3HC151530zinc finger, C3HC-type containing 1
INFERRED
HumanIP6K251447inositol hexakisphosphate kinase 2
INFERRED
HumanPOLK51426polymerase (DNA directed) kappa
Click here to display 61 evidence detail records.
XRefs (1)

XRef Types:
mp : 1


ToppGene Datasets:
none : 1
ToppGene DatasetsXRef TypeXRef IdXRefValuesSourceTop % Rank
MPimg MP:0008058abnormal DNA repair0self