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Details
Link-It Detail - Jax Mouse Phenotype - abnormal basal ganglion morphology
Debug Stats
  • ### Total Build Time: 91 ms 21.791 KB
  • CONCEPT_NAME gt=6 ms Completed: 6 ms rowSize= 396 bytes
  • CONCEPT_SOLR_HIT_STATS gt=0 Completed: 0 ms rowSize= 14 bytes
  • CONCEPT_DEFINITION gt=0 Completed: 0 ms rowSize= 373 bytes
  • CONCEPT_SYNONYM gt=0 Completed: 0 ms rowSize= 191 bytes
  • Skipping details on: CONCEPT_TEXT gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_SEMANTIC_TYPE gt=1 ms Completed: 1 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_NAMESPACE gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_PARENTS gt=0 Completed: 0 ms rowSize= 584 bytes
  • CONCEPT_CHILDREN gt=10 ms Completed: 10 ms rowSize= 2.416 KB
  • CONCEPT_ANCESTRAL_ROOTS gt=0 Completed: 0 ms rowSize= 1.575 KB
  • CONCEPT_RELATIONSHIPS gt=2 ms Completed: 2 ms rowSize= 106 bytes
  • CONCEPT_GENES gt=67 ms Completed: 67 ms rowSize= 14.976 KB
  • CONCEPT_XREFS gt=4 ms Completed: 4 ms rowSize= 1.172 KB
  • CONCEPT_ANCILLARY gt=1 ms Completed: 1 ms rowSize= 14 bytes
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Jax Mouse Phenotype (1)
abnormal basal ganglion morphology MP:0006007
Definition (1)
any structural anomaly of any of a group of nuclei associated with the ability to carry out willed movements, including the caudate, putamen, nucleus accumbens, globus pallidus, substantia nigra, and subthalamic nucleus
Synonyms (1)
"abnormal basal ganglia morphology" EXACT
Parents (1)
img abnormal forebrain morphology MP:0000783
Children (5)
img abnormal substantia nigra morphology MP:0000836
img abnormal globus pallidus morphology MP:0004081
img abnormal subthalamic nucleus morphology MP:0000835
img abnormal striatum morphology MP:0004077
img loss of basal ganglia neurons MP:0003242
Ancestral Roots
RootRoot Plus OneDepthParent
img mammalian phenotype MP:0000001img nervous system phenotype MP:00036316img abnormal forebrain morphology MP:0000783
Genes (79)

Species:
human : 79
Page Size
Current 25
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Current 1
SpeciesGeneGeneIdGene NameEvidence
HumanOCLN100506658occludin
Click here to display 23 evidence detail records.
HumanLHX8431707LIM homeobox 8
INFERRED
HumanGSX1219409GS homeobox 1
INFERRED
HumanGSX2170825GS homeobox 2
INFERRED
HumanARX170302aristaless related homeobox
INFERRED
HumanLRRK2120892leucine-rich repeat kinase 2
INFERRED
HumanZIC585416Zic family member 5
Click here to display 23 evidence detail records.
HumanARL684100ADP-ribosylation factor-like 6
INFERRED
HumanFUZ80199fuzzy planar cell polarity protein
INFERRED
HumanLYNX166004Ly6/neurotoxin 1
INFERRED
HumanDLGAP358512discs, large (Drosophila) homolog-associated protein 3
INFERRED
HumanVANGL257216VANGL planar cell polarity protein 2
INFERRED
HumanZDHHC1354503zinc finger, DHHC-type containing 13
INFERRED
HumanHIPK228996homeodomain interacting protein kinase 2
INFERRED
HumanHTRA227429HtrA serine peptidase 2
Click here to display 23 evidence detail records.
HumanSLITRK526050SLIT and NTRK-like family, member 5
INFERRED
HumanPLXNB223654plexin B2
INFERRED
HumanZDHHC1723390zinc finger, DHHC-type containing 17
INFERRED
HumanVPS13A23230vacuolar protein sorting 13 homolog A (S. cerevisiae)
INFERRED
HumanPPARGC1A10891peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
Click here to display 23 evidence detail records.
HumanATG710533autophagy related 7
INFERRED
HumanHYOU110525hypoxia up-regulated 1
INFERRED
HumanVTI1B10490vesicle transport through interaction with t-SNAREs 1B
INFERRED
HumanTUBB310381tubulin, beta 3 class III
Click here to display 23 evidence detail records.
HumanNR1H310062nuclear receptor subfamily 1, group H, member 3
INFERRED
XRefs (1)

XRef Types:
mp : 1


ToppGene Datasets:
none : 1
ToppGene DatasetsXRef TypeXRef IdXRefValuesSourceTop % Rank
MPimg MP:0006007abnormal basal ganglion morphology0self