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Details
Link-It Detail - Jax Mouse Phenotype - abnormal brainstem morphology
Debug Stats
  • ### Total Build Time: 142 ms 22.236 KB
  • CONCEPT_NAME gt=3 ms Completed: 3 ms rowSize= 386 bytes
  • CONCEPT_SOLR_HIT_STATS gt=0 Completed: 0 ms rowSize= 14 bytes
  • CONCEPT_DEFINITION gt=0 Completed: 0 ms rowSize= 210 bytes
  • CONCEPT_SYNONYM gt=0 Completed: 0 ms rowSize= 177 bytes
  • Skipping details on: CONCEPT_TEXT gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_SEMANTIC_TYPE gt=1 ms Completed: 1 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_NAMESPACE gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_PARENTS gt=5 ms Completed: 5 ms rowSize= 580 bytes
  • CONCEPT_CHILDREN gt=5 ms Completed: 5 ms rowSize= 2.864 KB
  • CONCEPT_ANCESTRAL_ROOTS gt=0 Completed: 0 ms rowSize= 1.571 KB
  • CONCEPT_RELATIONSHIPS gt=1 ms Completed: 1 ms rowSize= 106 bytes
  • CONCEPT_GENES gt=122 ms Completed: 122 ms rowSize= 15.168 KB
  • CONCEPT_XREFS gt=4 ms Completed: 4 ms rowSize= 1.167 KB
  • CONCEPT_ANCILLARY gt=1 ms Completed: 1 ms rowSize= 14 bytes
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Jax Mouse Phenotype (1)
abnormal brainstem morphology MP:0005277
Definition (1)
any structural anomaly of the midbrain, pons, or medulla
Synonyms (1)
"brainstem dysplasia" EXACT
Parents (1)
img abnormal brain morphology MP:0002152
Children (6)
img abnormal midbrain morphology MP:0000897
img abnormal brainstem copper level MP:0011216
img abnormal medulla oblongata morphology MP:0000846
img abnormal pons morphology MP:0000848
img abnormal cochlear nucleus morphology MP:0006333
img abnormal Raphe nucleus morphology MP:0004861
Ancestral Roots
RootRoot Plus OneDepthParent
img mammalian phenotype MP:0000001img nervous system phenotype MP:00036315img abnormal brain morphology MP:0002152
Genes (173)

Species:
human : 173
Page Size
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SpeciesGeneGeneIdGene NameEvidence
HumanPIKFYVE200576phosphoinositide kinase, FYVE finger containing
Click here to display 49 evidence detail records.
HumanOLIG3167826oligodendrocyte transcription factor 3
INFERRED
HumanDBX1120237developing brain homeobox 1
INFERRED
HumanKDM2B84678lysine (K)-specific demethylase 2B
INFERRED
HumanNKX6-284504
INFERRED
HumanTFAP2D83741transcription factor AP-2 delta (activating enhancer binding protein 2 delta)
INFERRED
HumanSCUBE180274signal peptide, CUB domain, EGF-like 1
INFERRED
HumanFUZ80199fuzzy planar cell polarity protein
INFERRED
HumanWLS79971wntless homolog (Drosophila)
INFERRED
HumanFKRP79147fukutin related protein
Click here to display 49 evidence detail records.
HumanROBO364221roundabout, axon guidance receptor, homolog 3 (Drosophila)
INFERRED
HumanNPAS364067neuronal PAS domain protein 3
INFERRED
HumanNEUROD458158neuronal differentiation 4
INFERRED
HumanVANGL257216VANGL planar cell polarity protein 2
INFERRED
HumanPDSS257107prenyl (decaprenyl) diphosphate synthase, subunit 2
INFERRED
HumanHHAT55733hedgehog acyltransferase
INFERRED
HumanVAC1455697Vac14 homolog (S. cerevisiae)
INFERRED
HumanSTRBP55342spermatid perinuclear RNA binding protein
INFERRED
HumanFBXW755294F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
INFERRED
HumanMKS154903Meckel syndrome, type 1
INFERRED
HumanIL17RD54756interleukin 17 receptor D
INFERRED
HumanUCHL551377ubiquitin carboxyl-terminal hydrolase L5
INFERRED
HumanLEF151176lymphoid enhancer-binding factor 1
INFERRED
HumanRAX30062retina and anterior neural fold homeobox
INFERRED
HumanHIPK228996homeodomain interacting protein kinase 2
INFERRED
XRefs (1)

XRef Types:
mp : 1


ToppGene Datasets:
none : 1
ToppGene DatasetsXRef TypeXRef IdXRefValuesSourceTop % Rank
MPimg MP:0005277abnormal brainstem morphology0self