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Details
Link-It Detail - Gene Ontology: Biological Processes - DNA ligation
Debug Stats
  • ### Total Build Time: 45 ms 28.799 KB
  • CONCEPT_NAME gt=2 ms Completed: 1 ms rowSize= 348 bytes
  • CONCEPT_SOLR_HIT_STATS gt=0 Completed: 0 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_DEFINITION gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • Skipping details on: CONCEPT_SYNONYM gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • Skipping details on: CONCEPT_TEXT gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_SEMANTIC_TYPE gt=0 Completed: 0 ms rowSize= 14 bytes
  • CONCEPT_NAMESPACE gt=0 Completed: 0 ms rowSize= 170 bytes
  • CONCEPT_PARENTS gt=6 ms Completed: 6 ms rowSize= 540 bytes
  • CONCEPT_CHILDREN gt=6 ms Completed: 6 ms rowSize= 2.690 KB
  • CONCEPT_ANCESTRAL_ROOTS gt=0 Completed: 0 ms rowSize= 6.333 KB
  • CONCEPT_RELATIONSHIPS gt=1 ms Completed: 1 ms rowSize= 106 bytes
  • CONCEPT_GENES gt=29 ms Completed: 29 ms rowSize= 17.482 KB
  • CONCEPT_XREFS gt=1 ms Completed: 1 ms rowSize= 1.115 KB
  • CONCEPT_ANCILLARY gt=0 Completed: 0 ms rowSize= 14 bytes
  • Reload Stats
Gene Ontology: Biological Processes (1)
DNA ligation GO:0006266
Namespace (1)
biological_process
Parents (1)
img DNA metabolic process GO:0006259
Children (6)
img regulation of DNA ligation GO:0051105
img positive regulation of DNA ligation GO:0051106
img DNA ligation involved in DNA repair GO:0051103
img negative regulation of DNA ligation GO:0051107
img DNA ligation involved in DNA-dependent DNA replication GO:0051104
img DNA ligation involved in DNA recombination GO:0051102
Ancestral Roots
RootRoot Plus OneDepthParent
img biological_process GO:0008150img cellular process GO:00099878img DNA metabolic process GO:0006259
img biological_process GO:0008150img metabolic process GO:00081528img DNA metabolic process GO:0006259
img biological_process GO:0008150img metabolic process GO:00081527img DNA metabolic process GO:0006259
img biological_process GO:0008150img cellular process GO:00099876img DNA metabolic process GO:0006259
img biological_process GO:0008150img metabolic process GO:00081526img DNA metabolic process GO:0006259
Genes (20)

Species:
human : 11
mouse : 9
SpeciesGeneGeneIdGene NameEvidence
MouseLig4319583ligase IV, DNA, ATP-dependent
img GO IDA, Pubmed Id: 15194694, Gene Ontology ID: GO:0006266
img GO IMP, Pubmed Id: 15968270, Gene Ontology ID: GO:0006266
img GO ISO, Gene Ontology ID: GO:0006266
MouseXrcc4108138X-ray repair complementing defective repair in Chinese hamster cells 4
img GO IDA, Pubmed Id: 15194694, Gene Ontology ID: GO:0006266
MouseHmgb297165high mobility group box 2
MouseAptx66408aprataxin
img GO IDA, Pubmed Id: 16964241, Gene Ontology ID: GO:0006266
MouseTop2a21973topoisomerase (DNA) II alpha 170kDa
img GO ISO, Gene Ontology ID: GO:0006266
MouseRad5119361RAD51 recombinase
MouseLig316882ligase III, DNA, ATP-dependent
img GO IBA, Gene Ontology ID: GO:0006266
MouseLig116881ligase I, DNA, ATP-dependent
img GO IBA, Gene Ontology ID: GO:0006266
MouseHmgb115289high mobility group box 1
HumanAPTX54840aprataxin
img GO IEA, Gene Ontology ID: GO:0006266
HumanXRCC47518X-ray repair complementing defective repair in Chinese hamster cells 4
HumanTOP2A7153topoisomerase (DNA) II alpha 170kDa
img GO IDA, Pubmed Id: 15491148, Gene Ontology ID: GO:0006266
HumanRAD515888RAD51 recombinase
HumanMGMT4255O-6-methylguanine-DNA methyltransferase
img GO TAS, Pubmed Id: 2188979, Gene Ontology ID: GO:0006266
HumanLIG43981ligase IV, DNA, ATP-dependent
img GO IDA, Pubmed Id: 12517771, Gene Ontology ID: GO:0006266
HumanLIG33980ligase III, DNA, ATP-dependent
HumanLIG13978ligase I, DNA, ATP-dependent
HumanHMGB23148high mobility group box 2
HumanHMGB13146high mobility group box 1
HumanXRCC62547X-ray repair complementing defective repair in Chinese hamster cells 6
img GO TAS, Pubmed Id: 9826654, Gene Ontology ID: GO:0006266
XRefs (1)

XRef Types:
go : 1


ToppGene Datasets:
none : 1
ToppGene DatasetsXRef TypeXRef IdXRefValuesSourceTop % Rank
GOimg GO:0006266DNA ligation0self