Logo arc image image
GATACA
  • Pin/Unpin Search
  • Pin/Unpin Details
Status:
Global Actions
Concepts: 0 (0)   Selected: 0 (0
Clear All Selections
 
Search
Text Search Results
Text Search Query:
none
Text Search Options:
none

Guided Help

Text Search Results
GraphTree Minimize or Maximize this Category
 Disease: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
GraphTree Minimize or Maximize this Category
 Anatomy: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
Minimize or Maximize this Category
 Gene: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
GraphTree Minimize or Maximize this Category
 Jax Mouse Phenotype: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
GraphTree Minimize or Maximize this Category
 Human Phenotype: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
GraphTree Minimize or Maximize this Category
 Gene Ontology: Biological Processes: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
GraphTree Minimize or Maximize this Category
 Gene Ontology: Cellular Component: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
GraphTree Minimize or Maximize this Category
 Gene Ontology: Molecular Function: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
Minimize or Maximize this Category
 Pathway: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
GraphTree Minimize or Maximize this Category
 Drug: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
Minimize or Maximize this Category
 Genomic Expression Atlas --
      Microarray Datasets: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
Minimize or Maximize this Category
 PubMed: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
GraphTree Minimize or Maximize this Category
 CoExpression Atlas: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
Minimize or Maximize this Category
 CoExpression: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
Minimize or Maximize this Category
 Interactions: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
Details
Link-It Detail - Disease - Primary sclerosing cholangitis
Debug Stats
  • ### Total Build Time: 82 ms 23.006 KB
  • CONCEPT_NAME gt=7 ms Completed: 7 ms rowSize= 358 bytes
  • CONCEPT_SOLR_HIT_STATS gt=0 Completed: 0 ms rowSize= 14 bytes
  • CONCEPT_DEFINITION gt=0 Completed: 0 ms rowSize= 438 bytes
  • Skipping details on: CONCEPT_SYNONYM gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • Skipping details on: CONCEPT_TEXT gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_SEMANTIC_TYPE gt=1 ms Completed: 1 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_NAMESPACE gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_PARENTS gt=0 Completed: 0 ms rowSize= 7 bytes
  • CONCEPT_CHILDREN gt=0 Completed: 0 ms rowSize= 8 bytes
  • CONCEPT_ANCESTRAL_ROOTS gt=0 Completed: 0 ms rowSize= 15 bytes
  • CONCEPT_RELATIONSHIPS gt=36 ms Completed: 36 ms rowSize= 5.227 KB
  • CONCEPT_GENES gt=24 ms Completed: 24 ms rowSize= 15.768 KB
  • CONCEPT_XREFS gt=13 ms Completed: 13 ms rowSize= 1.164 KB
  • CONCEPT_ANCILLARY gt=1 ms Completed: 1 ms rowSize= 14 bytes
  • Reload Stats
Disease (1)
Primary sclerosing cholangitis C0566602
Definition (1)
A chronic, autoimmune inflammatory liver disorder characterized by narrowing and scarring of the lumen of the bile ducts. It is often seen in patients with ulcerative colitis. Signs and symptoms include jaundice, fatigue, and malabsorption. It may lead to cirrhosis and liver failure.
Relationships (9)

Relation Types:
diso_​to_​anat : 4
diso_​to_​diso : 5


Relationships:
associated_​with : 2
expanded_​form_​of : 1
is_​associated_​anatomic_​site_​of : 1
is_​primary_​anatomic_​site_​of_​disease : 2
location_​of : 1
use : 2
Relation TypeCo-Occuring
Concept Count
RelationshipConcept
DISO_to_ANATlocation_ofimg Bile Ducts C0005400
DISO_to_ANATis_associated_anatomic_site_ofimg Biliary Tract C0005423
DISO_to_ANATis_primary_anatomic_site_of_diseaseimg Digestive System C0012240
DISO_to_ANATis_primary_anatomic_site_of_diseaseimg Hepatobiliary System C1711359
DISO_to_DISOassociated_withimg 43 CHRONIC INFLAMMATIONS C0021376
DISO_to_DISOuseimg CHOLANGITIS, STENOSING C0267923
DISO_to_DISOuseimg Cholangitis, Sclerosing C0008313
DISO_to_DISOexpanded_form_ofimg Primary sclerosing cholangitis C0566602
DISO_to_DISOassociated_withimg Sclerosis C0036429
Genes (12)

Species:
human : 12
SpeciesGeneGeneIdGene NameEvidence
HumanICOS29851inducible T-cell co-stimulator
img GENERIF, Score=1000, Pubmed Id: 16638702, UMLKSK CUI: C0566602
HumanABCB118647ATP-binding cassette, sub-family B (MDR/TAP), member 11
img GENERIF, Score=1000, Pubmed Id: 14999697, UMLKSK CUI: C0566602
HumanTNF7124tumor necrosis factor
img GAD, Score=1000, Pubmed Id: 10068102, UMLKSK CUI: C0566602
HumanCCL56352chemokine (C-C motif) ligand 5
img GENERIF, Score=1000, Pubmed Id: 17519498, UMLKSK CUI: C0566602
HumanMMP34314matrix metallopeptidase 3 (stromelysin 1, progelatinase)
img GENERIF, Score=1000, Pubmed Id: 15288468, UMLKSK CUI: C0566602
HumanKIR3DL13811killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 1
img GENERIF, Score=756, Pubmed Id: 17383044, UMLKSK CUI: C0566602
HumanIL63569interleukin 6 (interferon, beta 2)
img GENERIF, Score=1000, Pubmed Id: 18397431, UMLKSK CUI: C0566602
HumanICAM13383intercellular adhesion molecule 1
img GENERIF, Score=1000, Pubmed Id: 15123348, UMLKSK CUI: C0566602
HumanHLA-DRB13123
img GENERIF, Score=717, Pubmed Id: 16555323, UMLKSK CUI: C0566602
HumanCCR51234chemokine (C-C motif) receptor 5 (gene/pseudogene)
img GENERIF, Score=1000, Pubmed Id: 15215889, UMLKSK CUI: C0566602
HumanCFTR1080cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
img GENERIF, Score=1000, Pubmed Id: 12783301, UMLKSK CUI: C0566602
img GENERIF, Score=756, Pubmed Id: 12127423, UMLKSK CUI: C0566602
img GENERIF, Score=923, Pubmed Id: 17719933, UMLKSK CUI: C0566602
img GENERIF, Score=1000, Pubmed Id: 17719926, UMLKSK CUI: C0566602
HumanCDKN2A1029cyclin-dependent kinase inhibitor 2A
img GENERIF, Score=1000, Pubmed Id: 12360471, UMLKSK CUI: C0566602
XRefs (1)

XRef Types:
cui : 1


ToppGene Datasets:
none : 1
ToppGene DatasetsXRef TypeXRef IdXRefValuesSourceTop % Rank
CUIimg C0566602Primary sclerosing cholangitis0self