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Details
Link-It Detail - CoExpression Atlas - Cluster 4: ECM related genes up-regulated in dermal fibroblasts later than 30 min after TGFB1 [Gene ID=7040] addition; kept increasing with time.
Debug Stats
  • ### Total Build Time: 74 ms 11.021 KB
  • CONCEPT_NAME gt=1 ms Completed: 1 ms rowSize= 347 bytes
  • CONCEPT_SOLR_HIT_STATS gt=0 Completed: 0 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_DEFINITION gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • Skipping details on: CONCEPT_SYNONYM gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • Skipping details on: CONCEPT_TEXT gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_SEMANTIC_TYPE gt=1 ms Completed: 1 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_NAMESPACE gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_PARENTS gt=14 ms Completed: 14 ms rowSize= 540 bytes
  • CONCEPT_CHILDREN gt=0 Completed: 0 ms rowSize= 8 bytes
  • CONCEPT_ANCESTRAL_ROOTS gt=31 ms Completed: 31 ms rowSize= 1.329 KB
  • CONCEPT_RELATIONSHIPS gt=1 ms Completed: 1 ms rowSize= 106 bytes
  • CONCEPT_GENES gt=24 ms Completed: 24 ms rowSize= 7.473 KB
  • CONCEPT_XREFS gt=1 ms Completed: 1 ms rowSize= 1.201 KB
  • CONCEPT_ANCILLARY gt=1 ms Completed: 1 ms rowSize= 14 bytes
  • Reload Stats
CoExpression Atlas (1)
Cluster 4: ECM related genes up-regulated in dermal fibroblasts later than 30 min after TGFB1 [Gene ID=7040] addition; kept increasing with time. verrecchia_response_to_tgfb1_c4
Parents (1)
img coexpressionatlas_verrecchia_response_to_tgfb1 verrecchia_response_to_tgfb1
Ancestral Roots
RootRoot Plus OneDepthParent
img coexpressionatlas_verrecchia verrecchiaimg coexpressionatlas_verrecchia_response verrecchia_response5img coexpressionatlas_verrecchia_response_to_tgfb1 verrecchia_response_to_tgfb1
Genes (11)

Species:
human : 11
SpeciesGeneGeneIdGene NameEvidence
HumanMTA19112metastasis associated 1
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c4
HumanTHBS27058thrombospondin 2
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c4
HumanTHBS17057thrombospondin 1
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c4
HumanRAC15879ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c4
HumanPAK25062p21 protein (Cdc42/Rac)-activated kinase 2
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c4
HumanMMP174326matrix metallopeptidase 17 (membrane-inserted)
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c4
HumanMMP14312matrix metallopeptidase 1 (interstitial collagenase)
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c4
HumanLAMB13912laminin, beta 1
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c4
HumanTNC3371tenascin C
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c4
HumanEPHB22048EPH receptor B2
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c4
HumanCOL16A11307collagen, type XVI, alpha 1
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c4
XRefs (1)

XRef Types:
coexpatlas : 1


ToppGene Datasets:
none : 1
ToppGene DatasetsXRef TypeXRef IdXRefValuesSourceTop % Rank
coexpatlasimg verrecchia_response_to_tgfb1_c4Cluster 4: ECM related genes up-regulated in dermal fibroblasts later than 30 min after TGFB1 [Gene ID=7040] addition; kept increasing with time.0self