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Details
Link-It Detail - CoExpression Atlas - Candidate genes in significant regions of chromosomal copy number gains in a panel of melanoma samples.
Debug Stats
  • ### Total Build Time: 69 ms 21.646 KB
  • CONCEPT_NAME gt=1 ms Completed: 1 ms rowSize= 301 bytes
  • CONCEPT_SOLR_HIT_STATS gt=0 Completed: 0 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_DEFINITION gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • Skipping details on: CONCEPT_SYNONYM gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • Skipping details on: CONCEPT_TEXT gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_SEMANTIC_TYPE gt=15 ms Completed: 15 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_NAMESPACE gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_PARENTS gt=14 ms Completed: 14 ms rowSize= 520 bytes
  • CONCEPT_CHILDREN gt=0 Completed: 0 ms rowSize= 8 bytes
  • CONCEPT_ANCESTRAL_ROOTS gt=0 Completed: 0 ms rowSize= 1.241 KB
  • CONCEPT_RELATIONSHIPS gt=1 ms Completed: 1 ms rowSize= 106 bytes
  • CONCEPT_GENES gt=36 ms Completed: 36 ms rowSize= 18.298 KB
  • CONCEPT_XREFS gt=1 ms Completed: 1 ms rowSize= 1.152 KB
  • CONCEPT_ANCILLARY gt=1 ms Completed: 1 ms rowSize= 14 bytes
  • Reload Stats
CoExpression Atlas (1)
Candidate genes in significant regions of chromosomal copy number gains in a panel of melanoma samples. lin_melanoma_copy_number_up
Parents (1)
img coexpressionatlas_lin_melanoma_copy_number lin_melanoma_copy_number
Ancestral Roots
RootRoot Plus OneDepthParent
img coexpressionatlas_lin linimg coexpressionatlas_lin_melanoma lin_melanoma5img coexpressionatlas_lin_melanoma_copy_number lin_melanoma_copy_number
Genes (67)

Species:
human : 67
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Current 25
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SpeciesGeneGeneIdGene NameEvidence
HumanKU-MEL-3497048
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
HumanFLJ42258440049FLJ42258 protein
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
HumanC6orf201404220chromosome 6 open reading frame 201
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
HumanFAM217A222826family with sequence similarity 217, member A
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
HumanORAOV1220064oral cancer overexpressed 1
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
HumanKLF14136259Kruppel-like factor 14
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
HumanTBC1D16125058TBC1 domain family, member 16
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
HumanCEP4195681centrosomal protein 41kDa
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
HumanTBC1D3193594TBC1 domain family, member 31
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
HumanSCIN85477scinderin
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
HumanDERL179139derlin 1
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
HumanMRPL965005mitochondrial ribosomal protein L9
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
HumanMRPS3560488mitochondrial ribosomal protein S35
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
HumanFAM60A58516family with sequence similarity 60, member A
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
HumanPRUNE58497prune exopolyphosphatase
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
HumanSALL457167sal-like 4 (Drosophila)
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
HumanLYRM457128LYR motif containing 4
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
HumanCDC42SE156882CDC42 small effector 1
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
HumanFAM63A55793family with sequence similarity 63, member A
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
HumanZFP6455734ZFP64 zinc finger protein
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
HumanYARS251067tyrosyl-tRNA synthetase 2, mitochondrial
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
HumanCERS229956ceramide synthase 2
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
HumanCOPG226958coatomer protein complex, subunit gamma 2
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
HumanMKRN123608makorin ring finger protein 1
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
HumanPOGZ23126pogo transposable element with ZNF domain
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_up
XRefs (1)

XRef Types:
coexpatlas : 1


ToppGene Datasets:
none : 1
ToppGene DatasetsXRef TypeXRef IdXRefValuesSourceTop % Rank
coexpatlasimg lin_melanoma_copy_number_upCandidate genes in significant regions of chromosomal copy number gains in a panel of melanoma samples.0self