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Details
Link-It Detail - CoExpression Atlas - Cluster 7: selected apocrine and luminal genes clustered together across breast cancer samples.
Debug Stats
  • ### Total Build Time: 45 ms 16.515 KB
  • CONCEPT_NAME gt=1 ms Completed: 1 ms rowSize= 296 bytes
  • CONCEPT_SOLR_HIT_STATS gt=0 Completed: 0 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_DEFINITION gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • Skipping details on: CONCEPT_SYNONYM gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • Skipping details on: CONCEPT_TEXT gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_SEMANTIC_TYPE gt=1 ms Completed: 1 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_NAMESPACE gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_PARENTS gt=10 ms Completed: 10 ms rowSize= 540 bytes
  • CONCEPT_CHILDREN gt=0 Completed: 0 ms rowSize= 8 bytes
  • CONCEPT_ANCESTRAL_ROOTS gt=0 Completed: 0 ms rowSize= 1.280 KB
  • CONCEPT_RELATIONSHIPS gt=1 ms Completed: 1 ms rowSize= 106 bytes
  • CONCEPT_GENES gt=30 ms Completed: 30 ms rowSize= 13.115 KB
  • CONCEPT_XREFS gt=1 ms Completed: 1 ms rowSize= 1.150 KB
  • CONCEPT_ANCILLARY gt=1 ms Completed: 1 ms rowSize= 14 bytes
  • Reload Stats
CoExpression Atlas (1)
Cluster 7: selected apocrine and luminal genes clustered together across breast cancer samples. farmer_breast_cancer_cluster_7
Parents (1)
img coexpressionatlas_farmer_breast_cancer_cluster farmer_breast_cancer_cluster
Ancestral Roots
RootRoot Plus OneDepthParent
img coexpressionatlas_farmer farmerimg coexpressionatlas_farmer_breast farmer_breast5img coexpressionatlas_farmer_breast_cancer_cluster farmer_breast_cancer_cluster
Genes (20)

Species:
human : 20
SpeciesGeneGeneIdGene NameEvidence
HumanTMEM41B440026transmembrane protein 41B
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_7
HumanESRP280004epithelial splicing regulatory protein 2
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_7
HumanTMEM13565084transmembrane protein 135
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_7
HumanTRIM3655521tripartite motif containing 36
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_7
HumanRND127289Rho family GTPase 1
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_7
HumanSLC35A323443solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_7
HumanGSE123199Gse1 coiled-coil protein
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_7
HumanECI210455enoyl-CoA delta isomerase 2
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_7
HumanIRX510265iroquois homeobox 5
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_7
HumanDHRS210202dehydrogenase/reductase (SDR family) member 2
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_7
HumanSREBF16720sterol regulatory element binding transcription factor 1
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_7
HumanSCD6319stearoyl-CoA desaturase (delta-9-desaturase)
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_7
HumanMSX24488msh homeobox 2
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_7
HumanGHR2690growth hormone receptor
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_7
HumanFASN2194fatty acid synthase
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_7
HumanCDH1999cadherin 1, type 1, E-cadherin (epithelial)
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_7
HumanBLVRB645biliverdin reductase B (flavin reductase (NADPH))
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_7
HumanAR367androgen receptor
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_7
HumanALDH3B2222aldehyde dehydrogenase 3 family, member B2
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_7
HumanALCAM214activated leukocyte cell adhesion molecule
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_7
XRefs (1)

XRef Types:
coexpatlas : 1


ToppGene Datasets:
none : 1
ToppGene DatasetsXRef TypeXRef IdXRefValuesSourceTop % Rank
coexpatlasimg farmer_breast_cancer_cluster_7Cluster 7: selected apocrine and luminal genes clustered together across breast cancer samples.0self