Logo arc image image
GATACA
  • Pin/Unpin Search
  • Pin/Unpin Details
Status:
Global Actions
Concepts: 0 (0)   Selected: 0 (0
Clear All Selections
 
Search
Text Search Results
Text Search Query:
none
Text Search Options:
none

Guided Help

Text Search Results
GraphTree Minimize or Maximize this Category
 Disease: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
GraphTree Minimize or Maximize this Category
 Anatomy: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
Minimize or Maximize this Category
 Gene: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
GraphTree Minimize or Maximize this Category
 Jax Mouse Phenotype: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
GraphTree Minimize or Maximize this Category
 Human Phenotype: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
GraphTree Minimize or Maximize this Category
 Gene Ontology: Biological Processes: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
GraphTree Minimize or Maximize this Category
 Gene Ontology: Cellular Component: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
GraphTree Minimize or Maximize this Category
 Gene Ontology: Molecular Function: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
Minimize or Maximize this Category
 Pathway: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
GraphTree Minimize or Maximize this Category
 Drug: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
Minimize or Maximize this Category
 Genomic Expression Atlas --
      Microarray Datasets: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
Minimize or Maximize this Category
 PubMed: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
GraphTree Minimize or Maximize this Category
 CoExpression Atlas: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
Minimize or Maximize this Category
 CoExpression: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
Minimize or Maximize this Category
 Interactions: 0
No results.
 Concepts (w/Genes): 0 (0)   Selected (w/genes): 0 (0)
Details
Link-It Detail - CoExpression Atlas - Cluster 4: selected stromal genes clustered together across breast cancer samples.
Debug Stats
  • ### Total Build Time: 97 ms 13.994 KB
  • CONCEPT_NAME gt=1 ms Completed: 1 ms rowSize= 283 bytes
  • CONCEPT_SOLR_HIT_STATS gt=0 Completed: 0 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_DEFINITION gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • Skipping details on: CONCEPT_SYNONYM gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • Skipping details on: CONCEPT_TEXT gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_SEMANTIC_TYPE gt=1 ms Completed: 1 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_NAMESPACE gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_PARENTS gt=13 ms Completed: 13 ms rowSize= 540 bytes
  • CONCEPT_CHILDREN gt=0 Completed: 0 ms rowSize= 8 bytes
  • CONCEPT_ANCESTRAL_ROOTS gt=1 ms Completed: 1 ms rowSize= 1.280 KB
  • CONCEPT_RELATIONSHIPS gt=1 ms Completed: 1 ms rowSize= 106 bytes
  • CONCEPT_GENES gt=78 ms Completed: 78 ms rowSize= 10.620 KB
  • CONCEPT_XREFS gt=1 ms Completed: 1 ms rowSize= 1.138 KB
  • CONCEPT_ANCILLARY gt=1 ms Completed: 1 ms rowSize= 14 bytes
  • Reload Stats
CoExpression Atlas (1)
Cluster 4: selected stromal genes clustered together across breast cancer samples. farmer_breast_cancer_cluster_4
Parents (1)
img coexpressionatlas_farmer_breast_cancer_cluster farmer_breast_cancer_cluster
Ancestral Roots
RootRoot Plus OneDepthParent
img coexpressionatlas_farmer farmerimg coexpressionatlas_farmer_breast farmer_breast5img coexpressionatlas_farmer_breast_cancer_cluster farmer_breast_cancer_cluster
Genes (16)

Species:
human : 16
SpeciesGeneGeneIdGene NameEvidence
HumanSTEAP355240STEAP family member 3, metalloreductase
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_4
HumanMPP651678membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_4
HumanERO1L30001ERO1-like (S. cerevisiae)
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_4
HumanNDRG110397N-myc downstream regulated 1
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_4
HumanPDZK1IP110158PDZK1 interacting protein 1
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_4
HumanNAMPT10135nicotinamide phosphoribosyltransferase
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_4
HumanCLDN19076claudin 1
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_4
HumanKYNU8942kynureninase
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_4
HumanPEX38504peroxisomal biogenesis factor 3
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_4
HumanMALL7851mal, T-cell differentiation protein-like
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_4
HumanVLDLR7436very low density lipoprotein receptor
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_4
HumanSRD5A16715steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_4
HumanAGFG13267ArfGAP with FG repeats 1
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_4
HumanEGFR1956epidermal growth factor receptor
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_4
HumanSLC31A11317solute carrier family 31 (copper transporter), member 1
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_4
HumanADM133adrenomedullin
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_4
XRefs (1)

XRef Types:
coexpatlas : 1


ToppGene Datasets:
none : 1
ToppGene DatasetsXRef TypeXRef IdXRefValuesSourceTop % Rank
coexpatlasimg farmer_breast_cancer_cluster_4Cluster 4: selected stromal genes clustered together across breast cancer samples.0self