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Details
Link-It Detail - CoExpression Atlas - Cancer related genes down-regulated in any of four hepatoma cell lines following 24 h treatment with TSA [PubChem=5562].
Debug Stats
  • ### Total Build Time: 60 ms 15.270 KB
  • CONCEPT_NAME gt=1 ms Completed: 1 ms rowSize= 315 bytes
  • CONCEPT_SOLR_HIT_STATS gt=0 Completed: 0 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_DEFINITION gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • Skipping details on: CONCEPT_SYNONYM gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • Skipping details on: CONCEPT_TEXT gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_SEMANTIC_TYPE gt=0 Completed: 0 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_NAMESPACE gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_PARENTS gt=14 ms Completed: 14 ms rowSize= 561 bytes
  • CONCEPT_CHILDREN gt=0 Completed: 0 ms rowSize= 8 bytes
  • CONCEPT_ANCESTRAL_ROOTS gt=17 ms Completed: 17 ms rowSize= 1.301 KB
  • CONCEPT_RELATIONSHIPS gt=1 ms Completed: 1 ms rowSize= 106 bytes
  • CONCEPT_GENES gt=25 ms Completed: 25 ms rowSize= 11.798 KB
  • CONCEPT_XREFS gt=1 ms Completed: 1 ms rowSize= 1.163 KB
  • CONCEPT_ANCILLARY gt=1 ms Completed: 1 ms rowSize= 14 bytes
  • Reload Stats
CoExpression Atlas (1)
Cancer related genes down-regulated in any of four hepatoma cell lines following 24 h treatment with TSA [PubChem=5562]. chiba_response_to_tsa_dn
Parents (1)
img Genes up-regulated in more than one of several human hepatoma cell lines by TSA [PubChem=5562]. chiba_response_to_tsa
Ancestral Roots
RootRoot Plus OneDepthParent
img coexpressionatlas_chiba chibaimg coexpressionatlas_chiba_response chiba_response5img Genes up-regulated in more than one of several human hepatoma cell lines by TSA [PubChem=5562]. chiba_response_to_tsa
Genes (19)

Species:
human : 19
SpeciesGeneGeneIdGene NameEvidence
HumanADAM98754ADAM metallopeptidase domain 9
MSigDB: C2.cgp, coexpatlas Id: chiba_response_to_tsa_dn
HumanTPR7175translocated promoter region, nuclear basket protein
MSigDB: C2.cgp, coexpatlas Id: chiba_response_to_tsa_dn
HumanTP53BP27159tumor protein p53 binding protein, 2
MSigDB: C2.cgp, coexpatlas Id: chiba_response_to_tsa_dn
HumanTGFB27042transforming growth factor, beta 2
MSigDB: C2.cgp, coexpatlas Id: chiba_response_to_tsa_dn
HumanROCK16093Rho-associated, coiled-coil containing protein kinase 1
MSigDB: C2.cgp, coexpatlas Id: chiba_response_to_tsa_dn
HumanPTK25747protein tyrosine kinase 2
MSigDB: C2.cgp, coexpatlas Id: chiba_response_to_tsa_dn
HumanMAPK65597mitogen-activated protein kinase 6
MSigDB: C2.cgp, coexpatlas Id: chiba_response_to_tsa_dn
HumanMDM24193MDM2 oncogene, E3 ubiquitin protein ligase
MSigDB: C2.cgp, coexpatlas Id: chiba_response_to_tsa_dn
HumanLIG33980ligase III, DNA, ATP-dependent
MSigDB: C2.cgp, coexpatlas Id: chiba_response_to_tsa_dn
HumanLAMB13912laminin, beta 1
MSigDB: C2.cgp, coexpatlas Id: chiba_response_to_tsa_dn
HumanITGAV3685integrin, alpha V
MSigDB: C2.cgp, coexpatlas Id: chiba_response_to_tsa_dn
HumanITGA13672integrin, alpha 1
MSigDB: C2.cgp, coexpatlas Id: chiba_response_to_tsa_dn
HumanIL83576interleukin 8
MSigDB: C2.cgp, coexpatlas Id: chiba_response_to_tsa_dn
HumanHNRNPH13187heterogeneous nuclear ribonucleoprotein H1 (H)
MSigDB: C2.cgp, coexpatlas Id: chiba_response_to_tsa_dn
HumanGRB102887growth factor receptor-bound protein 10
MSigDB: C2.cgp, coexpatlas Id: chiba_response_to_tsa_dn
HumanEGFR1956epidermal growth factor receptor
MSigDB: C2.cgp, coexpatlas Id: chiba_response_to_tsa_dn
HumanDMD1756dystrophin
MSigDB: C2.cgp, coexpatlas Id: chiba_response_to_tsa_dn
HumanCEACAM1634carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)
MSigDB: C2.cgp, coexpatlas Id: chiba_response_to_tsa_dn
HumanBIRC3330baculoviral IAP repeat containing 3
MSigDB: C2.cgp, coexpatlas Id: chiba_response_to_tsa_dn
XRefs (1)

XRef Types:
coexpatlas : 1


ToppGene Datasets:
none : 1
ToppGene DatasetsXRef TypeXRef IdXRefValuesSourceTop % Rank
coexpatlasimg chiba_response_to_tsa_dnCancer related genes down-regulated in any of four hepatoma cell lines following 24 h treatment with TSA [PubChem=5562].0self