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Category Listing for coexpression:

NameCategoryKey TypeKey Id
img 'Cancer prone response profile' (CPRP): genes changed in response to bisphenol A [PubChem=6623] in epithelial cell cultures from patients at high risk of breast cancer.coexpressionCOEXPdairkee_cancer_prone_response_bpa
img 'Cancer prone response profile' (CPRP): genes changed in response to estradiol [PubChem=5757] in epithelial cell cultures from patients at high risk of breast cancer.coexpressionCOEXPdairkee_cancer_prone_response_e2
img 'Cancer prone response profile' (CPRP): genes common to estradiol and bisphenol A [PubChem=5757, 6623] response of epithelial cell cultures from patients at high risk of breast cancer.coexpressionCOEXPdairkee_cancer_prone_response_bpa_e2
img 'Early-TGFB1 signature': genes overexpressed in primary hepatocytes at an early phase of TGFB1 [Gene ID=7040] treatment; is associated with a less invasive phenotype.coexpressionCOEXPcoulouarn_temporal_tgfb1_signature_dn
img 'Late-TGFB1 signature': genes overexpressed in primary hepatocytes at a late phase of TGFB1 [Gene ID=7040] treatment; is associated with a more invasive phenotype.coexpressionCOEXPcoulouarn_temporal_tgfb1_signature_up
img 'PAX-FKHR signature': genes down-regulated by PAX3- or PAX7-FOXO1 [Gene ID=5081, 5077, 2308] fusion in primary alveolar rhabdomyosarcoma(ARMS) tumors.coexpressionCOEXPdavicioni_pax_foxo1_signature_in_arms_dn
img 'PAX-FKHR signature': genes up-regulated by PAX3- or PAX7-FOXO1 [Gene ID=5081, 5077, 2308] fusion in primary alveolar rhabdomyosarcoma(ARMS) tumors.coexpressionCOEXPdavicioni_pax_foxo1_signature_in_arms_up
img 'Spiked' genes: genes most highly up-regulated in multiple myeloma samples; were not differentially expressed as compared to the normal plasma cells.coexpressionCOEXPzhan_multiple_myeloma_spiked
img 'Wilm's tumor signature': genes highly expressed in Wilm's tumor samples compared to normal fetal kidney and a heterologous tumor, Burkit lymphoma.coexpressionCOEXPli_wilms_tumor
img 14 candidate differentiation markers in lung adenocarcinoma cells, noncancerous lung cells and peripheral blood cells.coexpressionCOEXPnakamura_lung_cancer_differentiation_markers
img 4NQO treatment and UV irradiation responding genes.coexpressionCOEXPkyng_dna_damage_by_4nqo_or_uv
img 50 genes the most significantly down-regulated in comparison of tumor vs non-tumor liver tissue from patients with hepatocellular carcinoma (HCC).coexpressionCOEXPlee_liver_cancer_top50
img 50 genes up-regulated in the pancreatic cancer cell lines (AsPC1, Hs766T, MiaPaCa2, Panc1) but not in the non-neoplastic cells (HPDE) by the combination of decitabine and TSA [PubChem=451668, 5562].coexpressionCOEXPsato_silenced_epigenetically_in_pancreatic_cancer
img 50 most interesting genes up-regulated in pancreatic cancer cell lines (AsPC1, Hs766T, MiaPaCa2, Panc1) but not in the non-neoplastic cells (HPDE) by TSA [PubChem=5562].coexpressionCOEXPsato_silenced_by_deacetylation_in_pancreatic_cancer
img 50 most interesting genes up-regulated in the pancreatic cancer cell lines (AsPC1, Hs766T, MiaPaCa2, Panc1) but not in the non-neoplastic cells (HPDE) by decitabine (5-aza-2'-deoxycytidine) [PubChem=451668].coexpressionCOEXPsato_silenced_by_methylation_in_pancreatic_cancer_2
img A biomarker of plasma signaling proteins that predicts clinical Alzheimer???s diagnosis.coexpressionCOEXPray_alzheimers_disease
img A cluster of genes specifically up-regulated in gastrointestinal stromal tumors (GIST).coexpressionCOEXPnielsen_gist
img A gene expression signature found in a subset of cancer patients suggestive of a deregulated immune or inflammatory response.coexpressionCOEXPeinav_interferon_signature_in_cancer
img A selection of genes whose expression displayed significant negative correlation with size of colorectal adenoma.coexpressionCOEXPsabates_colorectal_adenoma_size_dn
img A selection of genes whose expression displayed significant positive correlation with size of colorectal adenoma.coexpressionCOEXPsabates_colorectal_adenoma_size_up
img Acute stage-specific genes for adult T cell leukemia (ATL).coexpressionCOEXPchoi_atl_acute_stage
img Adenocarcinoma metastatic program genes up-regulated in A549 and H2126 cells (lung cancer) lacking functional STK11 [Gene ID=6794] but down-regulated by the normal gene.coexpressionCOEXPji_metastasis_repressed_by_stk11
img All common stress response genes (Human Environmental Stress Response, H-ESR).coexpressionCOEXPkyng_environmental_stress_response_up
img All marker genes down-regulated in the 'interferon' subclass of hepatocellular carcinoma (HCC).coexpressionCOEXPchiang_liver_cancer_subclass_interferon_dn
img All marker genes up-regulated in the 'interferon' subclass of hepatocellular carcinoma (HCC).coexpressionCOEXPchiang_liver_cancer_subclass_interferon_up
img Amplification hot spot 11: colocolized fragile sites and cancer genes in the 11q3 region.coexpressionCOEXPmyllykangas_amplification_hot_spot_11
img Amplification hot spot 12: colocolized fragile sites and cancer genes in the 17q11.1-q21; 17q25 region.coexpressionCOEXPmyllykangas_amplification_hot_spot_12
img Amplification hot spot 13: colocolized fragile sites and cancer genes in the Xq12-q28 region.coexpressionCOEXPmyllykangas_amplification_hot_spot_13
img Amplification hot spot 14: colocolized fragile sites and cancer genes in the 8q24.1-q24.3 region.coexpressionCOEXPmyllykangas_amplification_hot_spot_14
img Amplification hot spot 15: colocalized fragile sites and cancer genes in the 6p25-p11.1 region.coexpressionCOEXPmyllykangas_amplification_hot_spot_15
img Amplification hot spot 16: colocolized fragile sites and cancer genes in the 8q11.1-q24.3 region.coexpressionCOEXPmyllykangas_amplification_hot_spot_16
img Amplification hot spot 17: colocalized fragile sites and cancer genes in the 1q11-q44 region.coexpressionCOEXPmyllykangas_amplification_hot_spot_17
img Amplification hot spot 18: colocolized fragile sites and cancer genes in the 18q11.2-q23 region.coexpressionCOEXPmyllykangas_amplification_hot_spot_18
img Amplification hot spot 1: colocolized fragile sites and cancer genes in the Xp22.3-p11.1 region.coexpressionCOEXPmyllykangas_amplification_hot_spot_1
img Amplification hot spot 21: colocolized fragile sites and cancer genes in the 12q13-q21 region.coexpressionCOEXPmyllykangas_amplification_hot_spot_21
img Amplification hot spot 22: colocolized fragile sites and cancer genes in the 22q11.1-q13s region.coexpressionCOEXPmyllykangas_amplification_hot_spot_22
img Amplification hot spot 23: colocolized fragile sites and cancer genes in the 11q12-q25 region.coexpressionCOEXPmyllykangas_amplification_hot_spot_23
img Amplification hot spot 24: colocalized fragile sites and cancer genes in the 1q21-q24 region.coexpressionCOEXPmyllykangas_amplification_hot_spot_24
img Amplification hot spot 25: colocalized fragile sites and cancer genes in the 2q13-q36 region.coexpressionCOEXPmyllykangas_amplification_hot_spot_25
img Amplification hot spot 27: colocalized fragile sites and cancer genes in the 5p15.3-p15.1; 5p12-q35 region.coexpressionCOEXPmyllykangas_amplification_hot_spot_27
img Amplification hot spot 29: colocolized fragile sites and cancer genes in the 7p22-p13 region.coexpressionCOEXPmyllykangas_amplification_hot_spot_29
img Amplification hot spot 30: colocolized fragile sites and cancer genes in the 12q21-q24.3 region.coexpressionCOEXPmyllykangas_amplification_hot_spot_30
img Amplification hot spot 3: colocolized fragile sites and cancer genes in the 15q21-q26 region.coexpressionCOEXPmyllykangas_amplification_hot_spot_3
img Amplification hot spot 5: colocolized fragile sites and cancer genes in the 17q22-q25 region.coexpressionCOEXPmyllykangas_amplification_hot_spot_5
img Amplification hot spot 7: colocalized fragile sites and cancer genes in the 3q26.3-q29 region.coexpressionCOEXPmyllykangas_amplification_hot_spot_7
img Amplification hot spot 8: colocolized fragile sites and cancer genes in the 9q11-34 region.coexpressionCOEXPmyllykangas_amplification_hot_spot_8
img Amplification hot spot 9: colocolized fragile sites and cancer genes in the 8p23-q12; 8q23 region.coexpressionCOEXPmyllykangas_amplification_hot_spot_9
img An assortment of osteoblast transcriptional regulators.coexpressionCOEXPzaidi_osteoblast_transcription_factors
img Angiogenic and metastatic genes changed in RKO cells (colorectal cancer) upon perturbation of key components of AKT pathway.coexpressionCOEXPagarwal_akt_pathway_targets
img Angiogenic markers down-regulated in lymph endothelial cells upon infection with KSHV (Kaposi's sarcoma herpes virus).coexpressionCOEXPvart_kshv_infection_angiogenic_markers_dn
img Angiogenic markers up-regulated in lymph endothelial cells upon infection with KSHV (Kaposi's sarcoma herpes virus).coexpressionCOEXPvart_kshv_infection_angiogenic_markers_up
img Antigen processing and presentation genes down-regulated in JY cells (B lymphocytes) treated with trichostatin A (TSA) [PubChem=5562].coexpressionCOEXPpellicciotta_hdac_in_antigen_presentation_dn
img Antigen processing and presentation genes up-regulated in JY cells (B lymphocytes) treated with TSA [PubChem=5562].coexpressionCOEXPpellicciotta_hdac_in_antigen_presentation_up
img Apoptosis genes down-regulated by TP53 [Gene ID=7157] in HCT116 cells (colon cancer) treated with thymoquinone [PubChem=10281].coexpressionCOEXPgali_tp53_targets_apoptotic_dn
img Apoptosis genes up-regulated by TP53 [Gene ID=7157] in HCT116 cells (colon cancer) treated with thymoquinone [PubChem=10281].coexpressionCOEXPgali_tp53_targets_apoptotic_up
img Atherosclerotic process genes whose coronary expression changed after darapladib [PubChem=9939609] treatment.coexpressionCOEXPwilensky_response_to_darapladib
img B lymphocyte early differentiation genes (EDG): top genes down-regulated in tonsil B lymphocytes (TBC) compared to the tonsil plasma cells (TPC).coexpressionCOEXPzhan_early_differentiation_genes_dn
img B lymphocyte early differentiation genes (EDG): top genes up-regulated in tonsil B lymphocytes (TBC) compared to the tonsil plasma cells (TPC).coexpressionCOEXPzhan_early_differentiation_genes_up
img B lymphocyte late differentiation genes (LDG): top genes down-regulated in plasma cells from tonsils (TPC) compared to those from bone marrow (BPC).coexpressionCOEXPzhan_late_differentiation_genes_dn
img B lymphocyte late differentiation genes (LDG): top genes up-regulated in plasma cells from tonsils (TPC) compared to those from bone marrow (BPC).coexpressionCOEXPzhan_late_differentiation_genes_up
img Breast cancer compendium: 100 transcription regulators showing most correlated expression with the 9 'embryonic stem cell' transcription factors that are preferentially and coordinately overexpressed in the high-grade, ER-negative breast cancer tumors.coexpressionCOEXPbenporath_es_core_nine_correlated
img Cancer motility and invasion genes up-regulated by the AP-1 transcription factor.coexpressionCOEXPozanne_ap1_targets_up
img Cancer related genes down-regulated in any of four hepatoma cell lines following 24 h treatment with TSA [PubChem=5562].coexpressionCOEXPchiba_response_to_tsa_dn
img Cancer related genes up-regulated in any of four hepatoma cell lines following 24 h treatment with TSA [PubChem=5562].coexpressionCOEXPchiba_response_to_tsa_up
img Candidate genes in genomic amplification regions in hepatocellular carcinoma (HCC) samples.coexpressionCOEXPmidorikawa_amplified_in_liver_cancer
img Candidate genes in significant regions of chromosomal copy number gains in a panel of melanoma samples.coexpressionCOEXPlin_melanoma_copy_number_up
img Candidate genes in significant regions of chromosomal copy number losses in a panel of melanoma samples.coexpressionCOEXPlin_melanoma_copy_number_dn
img Candidate genes in the pericentromeric microdeletion in 16p11.2-p12.2 associated with developmental disabilities.coexpressionCOEXPballif_developmental_disability_p16_p12_deletion
img Candidate genes in the regions of copy number gain in gastric cancer cell lines.coexpressionCOEXPtakada_gastric_cancer_copy_number_up
img Candidate genes in the regions of copy number loss in gastric cancer cell lines.coexpressionCOEXPtakada_gastric_cancer_copy_number_dn
img Candidate genes specific for recent thymic emigrants (RTEs).coexpressionCOEXPlee_recent_thymic_emigrant
img Candidate lung adenocarcinoma tumor markers.coexpressionCOEXPnakamura_lung_cancer_markers
img Candidate progression biomarkers up-regulated in transition from non-tumor-risk associated to tumor-risk associated Barrett's esophagus and then to esophageal adenocarcinoma (EAC).coexpressionCOEXPwang_esophagus_cancer_progression_up
img Candidate substrate proteins of AURKB [Gene ID=9212].coexpressionCOEXPohashi_aurkb_targets
img Cell cycle genes changed in H1299 cells (lung cancer) after overexpression of either P53 [Gene ID=7157] or P73 [Gene ID=7161].coexpressionCOEXPscian_cell_cycle_targets_of_tp53_and_tp73_dn
img Cell cycle genes changed in H1299 cells (lung cancer) after overexpression of either P53 [Gene ID=7157] or P73 [Gene ID=7161].coexpressionCOEXPscian_cell_cycle_targets_of_tp53_and_tp73_up
img Cellular genes up-regulated in forskin fibroblasts by expression of CMV EI86 protein off an adenovirus vector.coexpressionCOEXPsong_targets_of_ie86_cmv_protein
img Cellular proliferation, growth, apoptosis and Wnt signaling genes up-regulated in SNU638 cells (gastric cancer) by overexpression of SFRP2 [Gene ID=6423] off a plasmid vector.coexpressionCOEXPnojima_sfrp2_targets_up
img Cellular proliferation, growth, apoptosis and Wnt signaling genes up-regulated in SNU638 cells (gastric cancer) by overexpression of SFRP2 [Gene ID=6423] off a plasmid vector.coexpressionCOEXPnojima_sfrp2_targets_dn
img Cluster 0: genes changed in primary keratinocytes by UVB irradiation.coexpressionCOEXPsesto_response_to_uv_c0
img Cluster 12 of method A: up-regulation of these genes in patients with non-small cell lung cancer (NSCLC) predicts good survival outcome.coexpressionCOEXPshedden_lung_cancer_good_survival_a12
img Cluster 1: ECM related genes up-regulated in dermal fibroblasts within 30 min after TGFB1 [Gene ID=7040] addition, and which kept increasing with time.coexpressionCOEXPverrecchia_response_to_tgfb1_c1
img Cluster 1: genes changed in primary keratinocytes by UVB irradiation.coexpressionCOEXPsesto_response_to_uv_c1
img Cluster 1: genes up-regulated by RB1 [Gene ID=5925], CDNK2A [Gene ID=1029], and one of the E2Fs (E2F1, E2F2, or E2F3 [Gene ID=1869, 1870, 1871]).coexpressionCOEXPvernell_retinoblastoma_pathway_up
img Cluster 1: genes up-regulated in B493-6 cells (B lymphocytes) upon serum stimulation but not by affected by MYC [Gene ID=4609].coexpressionCOEXPschlosser_serum_response_up
img Cluster 1: genes with similar expression profiles across follicular thyrorid carcinoma (FTC) samples.coexpressionCOEXPlui_thyroid_cancer_cluster_1
img Cluster 1: interferon, T and B lymphocyte genes clustered together across breast cancer samples.coexpressionCOEXPfarmer_breast_cancer_cluster_1
img Cluster 2: ECM related genes up-regulated in dermal fibroblasts within 30 min after TGFB1 [Gene ID=7040] addition; reached a plateau after that.coexpressionCOEXPverrecchia_response_to_tgfb1_c2
img Cluster 2: genes changed in primary keratinocytes by UVB irradiation.coexpressionCOEXPsesto_response_to_uv_c2
img Cluster 2: genes down-regulated by RB1 [Gene ID=5925], CDNK2A [Gene ID=1029], and one of the E2Fs (E2F1, E2F2, or E2F3 [Gene ID=1869, 1870, 1871]).coexpressionCOEXPvernell_retinoblastoma_pathway_dn
img Cluster 2: genes up-regulated in B493-6 cells (B lymphocytes) by serum alone or in combination with MYC [Gene ID=4609] but not by MYC alone.coexpressionCOEXPschlosser_serum_response_augmented_by_myc
img Cluster 2: genes with similar expression profiles across follicular thyroid carcinoma (FTC) samples.coexpressionCOEXPlui_thyroid_cancer_cluster_2
img Cluster 2: selected proliferation and 8q amplicon genes clustered together across breast cancer samples.coexpressionCOEXPfarmer_breast_cancer_cluster_2
img Cluster 3: ECM related genes up-regulated in dermal fibroblasts within 30 min after TGFB1 [Gene ID=7040] addition; returned rapidly to basal level after that.coexpressionCOEXPverrecchia_response_to_tgfb1_c3
img Cluster 3: genes changed in primary keratinocytes by UVB irradiation.coexpressionCOEXPsesto_response_to_uv_c3
img Cluster 3: genes strongly up-regulated in B493-6 cells (B lymphocytes) by a combination of MYC [Gene ID=4609] and serum but not by each of them alone.coexpressionCOEXPschlosser_myc_and_serum_response_synergy
img Cluster 3: genes up-regulated in B2264-19/3 cells (primary B lymphocytes) within 60-180 min after activation of LMP1 (an oncogene encoded by Epstein???Barr virus, EBV).coexpressionCOEXPdirmeier_lmp1_response_late_up
img Cluster 3: genes with similar expression profiles across follicular thyrorid carcinoma (FTC) samples; genes in this cluster correlated well with the presence of PAX8-PPARG [Gene ID=7849, 5468] fusion protein.coexpressionCOEXPlui_thyroid_cancer_cluster_3
img Cluster 3: selected apocrine, basal and hypoxia genes clustered together across breast cancer samples.coexpressionCOEXPfarmer_breast_cancer_cluster_3
img Cluster 4 of method A: up-regulation of these genes in patients with non-small cell lung cancer (NSCLC) predicts good survival outcome.coexpressionCOEXPshedden_lung_cancer_good_survival_a4
img Cluster 4: ECM related genes up-regulated in dermal fibroblasts later than 30 min after TGFB1 [Gene ID=7040] addition; kept increasing with time.coexpressionCOEXPverrecchia_response_to_tgfb1_c4
img Cluster 4: genes changed in primary keratinocytes by UVB irradiation.coexpressionCOEXPsesto_response_to_uv_c4
img Cluster 4: genes down-regulated in B2264-19/3 cells (primary B lymphocytes) within 60-180 min after activation of LMP1 (an oncogene encoded by Epstein???Barr virus, EBV).coexpressionCOEXPdirmeier_lmp1_response_late_dn
img Cluster 4: genes down-regulated in B493-6 cells (B lymphocytes) upon serum stimulation but not affected by MYC [Gene ID=4609].coexpressionCOEXPschlosser_serum_response_dn
img Cluster 4: genes with similar expression profiles across follicular thyroid carcinoma (FTC) samples.coexpressionCOEXPlui_thyroid_cancer_cluster_4
img Cluster 4: selected stromal genes clustered together across breast cancer samples.coexpressionCOEXPfarmer_breast_cancer_cluster_4
img Cluster 5 of method A: up-regulation of these genes in patients with non-small cell lung cancer (NSCLC) predicts good survival outcome.coexpressionCOEXPshedden_lung_cancer_good_survival_a5
img Cluster 5: ECM related genes up-regulated in dermal fibroblasts later than 30 min after TGFB1 [Gene ID=7040] addition; decreased slowly after the peak at 120 min time point.coexpressionCOEXPverrecchia_response_to_tgfb1_c5
img Cluster 5: genes changed in primary keratinocytes by UVB irradiation.coexpressionCOEXPsesto_response_to_uv_c5
img Cluster 5: genes up-regulated in B493-6 cells (B lymphocytes) by MYC [Gene ID=4609] alone or in combination with serum but not by serum alone.coexpressionCOEXPschlosser_myc_targets_and_serum_response_up
img Cluster 5: genes up-regulated in SW260 cells (colon cancer) by curcumin and sulindac [PubChem=969516, 5352].coexpressionCOEXPmariadason_response_to_curcumin_sulindac_5
img Cluster 5: genes with similar expression profiles across follicular thyroid carcinoma (FTC) samples.coexpressionCOEXPlui_thyroid_cancer_cluster_5
img Cluster 5: selected 17q21_23 amplicon genes clustered together across breast cancer samples.coexpressionCOEXPfarmer_breast_cancer_cluster_5
img Cluster 6 of method A: up-regulation of these genes in patients with non???small cell lung cancer (NSCLC) predicts poor survival outcome.coexpressionCOEXPshedden_lung_cancer_poor_survival_a6
img Cluster 6: ECM related genes up-regulated in dermal fibroblasts later than 30 min after TGFB1 [Gene ID=7040] addition; slowly increased up to 120 min time point, then reached a plateau.coexpressionCOEXPverrecchia_response_to_tgfb1_c6
img Cluster 6: genes changed in primary keratinocytes by UVB irradiation.coexpressionCOEXPsesto_response_to_uv_c6
img Cluster 6: genes down-regulated in B493-6 cells (B lymphocytes) by MYC [Gene ID=4609] in combination with serum but not affected by serum alone; they are also up-regulated by MYC alone.coexpressionCOEXPschlosser_myc_targets_and_serum_response_dn
img Cluster 6: selected luminal genes clustered together across breast cancer samples.coexpressionCOEXPfarmer_breast_cancer_cluster_6
img Cluster 7: genes changed in primary keratinocytes by UVB irradiation.coexpressionCOEXPsesto_response_to_uv_c7
img Cluster 7: genes up-regulated in B493-6 cells (B lymphocytes) by MYC [Gene ID=4609] and down-regulated by the combination of MYC and serum.coexpressionCOEXPschlosser_myc_targets_repressed_by_serum
img Cluster 7: selected apocrine and luminal genes clustered together across breast cancer samples.coexpressionCOEXPfarmer_breast_cancer_cluster_7
img Cluster 8: genes changed in primary keratinocytes by UVB irradiation.coexpressionCOEXPsesto_response_to_uv_c8
img Cluster 8: selected ERBB2 [Gene ID=2064] amplicon genes clustered together across breast cancer samples.coexpressionCOEXPfarmer_breast_cancer_cluster_8
img Cluster G1: genes most highly up-regulated in NHEK cells (normal keratinocyte) between 6 h and 12 h after UV-B irradiation.coexpressionCOEXPdazard_uv_response_cluster_g1
img Cluster G24: genes induced in NHEK (normal keratinocyte) but not in SCC12B2 cells (squamous cell carcinoma) by UV-B radiation.coexpressionCOEXPdazard_uv_response_cluster_g24
img Cluster G2: genes increasingly up-regulated in NHEK cells (normal keratinocyte) and reaching maximum levels at 12 h and 24 h after UV-B irradiation.coexpressionCOEXPdazard_uv_response_cluster_g2
img Cluster G3: genes increasingly up-regulated in NHEK cells (normal keratinocyte) after 6 h time point upon UV-B irradiation.coexpressionCOEXPdazard_uv_response_cluster_g3
img Cluster G4: genes increasingly up-regulated in NHEK cells (normal keratinocyte) after 12 h time point after UV-B irradiation.coexpressionCOEXPdazard_uv_response_cluster_g4
img Cluster G5: genes up-regulated in NHEK cells (normal keratinocyte) at 3 h and 24 h time points after UV-B irradiation.coexpressionCOEXPdazard_uv_response_cluster_g5
img Cluster G6: genes increasingly down-regulated in NHEK cells (normal keratinocyte) after UV-B irradiation.coexpressionCOEXPdazard_uv_response_cluster_g6
img Cluster a: genes identifying an intrinsic group in head and neck squamous cell carcinoma (HNSCC).coexpressionCOEXPrickman_head_and_neck_cancer_a
img Cluster b: genes identifying an intrinsic group in head and neck squamous cell carcinoma (HNSCC).coexpressionCOEXPrickman_head_and_neck_cancer_b
img Cluster c: genes identifying an intrinsic group in head and neck squamous cell carcinoma (HNSCC).coexpressionCOEXPrickman_head_and_neck_cancer_c
img Cluster d1: genes down-regulated in WS1 cells (fibroblast) at 6 h after irradiation with high dose UV-C.coexpressionCOEXPgentile_uv_response_cluster_d1
img Cluster d2: genes down-regulated consistently in WS1 cells (fibroblast) between 6 h and 24 h after irradiation with high dose UV-C.coexpressionCOEXPgentile_uv_response_cluster_d2
img Cluster d3: genes progressively down-regulated in WS1 cells (fibroblast) through 12 h irradiation with high dose UV-C.coexpressionCOEXPgentile_response_cluster_d3
img Cluster d4: genes progressively down-regulated in WS1 cells (fibroblast) through 12 h after irradiation with high dose UV-C.coexpressionCOEXPgentile_uv_response_cluster_d4
img Cluster d5: genes progressively down-regulated in WS1 cells (fibroblast) through 18 h after irradiation with high dose UV-C.coexpressionCOEXPgentile_uv_response_cluster_d5
img Cluster d6: genes progressively down-regulated in WS1 cells (fibroblast) through 18 h after irradiation with high dose UV-C.coexpressionCOEXPgentile_uv_response_cluster_d6
img Cluster d7: genes progressively down-regulated in WS1 cells (fibroblast) through 18 h after irradiation with high dose UV-C.coexpressionCOEXPgentile_uv_response_cluster_d7
img Cluster d8: genes progressively down-regulated in WS1 cells (fibroblast) through 18 h after irradiation with high dose UV-C.coexpressionCOEXPgentile_uv_response_cluster_d8
img Cluster d9: genes progressively down-regulated in WS1 cells (fibroblast) through 24 h after irradiation with high dose UV-C.coexpressionCOEXPgentile_uv_response_cluster_d9
img Cluster d: genes identifying an intrinsic group in head and neck squamous cell carcinoma (HNSCC).coexpressionCOEXPrickman_head_and_neck_cancer_d
img Cluster e: genes identifying an intrinsic group in head and neck squamous cell carcinoma (HNSCC).coexpressionCOEXPrickman_head_and_neck_cancer_e
img Cluster f: genes identifying an intrinsic group in head and neck squamous cell carcinoma (HNSCC).coexpressionCOEXPrickman_head_and_neck_cancer_f
img Clusters 1 and 2: genes up-regulated in B2264-19/3 cells (primary B lymphocytes) within 30-60 min after activation of LMP1 (an oncogene encoded by Epstein???Barr virus, EBV).coexpressionCOEXPdirmeier_lmp1_response_early
img Cohesin targets identified by ChIP-chip which were up-regulated after knockdown of CTCF [Gene ID=10664] and RAD21 [Gene ID=5885] by RNAi.coexpressionCOEXPwendt_cohesin_targets_up
img Common down-regulated transcripts in fibroblasts expressing either XP/CS or TDD mutant forms of ERCC3 [Gene ID=2071], after UVC irradiation.coexpressionCOEXPdacosta_uv_response_via_ercc3_common_dn
img Common up-regulated transcripts in fibroblasts expressing either XP/CS or TDD mutant forms of ERCC3 [Gene ID=2071], after UVC irradiation.coexpressionCOEXPdacosta_uv_response_via_ercc3_common_up
img Components of RNA post-transcriptional modification machinery up-regulated in MDA-MB-435 cells (breast cancer) whose metastatic potential has been reduced by expression of NME1 [Gene ID=4830].coexpressionCOEXPlee_metastasis_and_rna_processing_up
img Composition of the 2 MDa human PCAF complex.coexpressionCOEXPnagy_pcaf_components_human
img Composition of the 2 MDa human STAGA complex containing KAT2A [Gene ID=2648].coexpressionCOEXPnagy_staga_components_human
img Composition of the 2 MDa human TFTC complex containing KAT2A [Gene ID=2648].coexpressionCOEXPnagy_tftc_components_human
img DNA methylation status of germline-specific genes with high-CpG-density promoters (HCP) in primary fibroblasts: UP=methylated, DN=unmethylated.coexpressionCOEXPweber_methylated_hcp_in_fibroblast_dn
img DNA methylation status of germline-specific genes with high-CpG-density promoters (HCP) in primary fibroblasts: UP=methylated, DN=unmethylated.coexpressionCOEXPweber_methylated_hcp_in_fibroblast_up
img DNA methylation status of germline-specific genes with high-CpG-density promoters (HCP) in sperm: UP=methylated, DN=unmethylated.coexpressionCOEXPweber_methylated_hcp_in_sperm_dn
img DNA methylation status of germline-specific genes with high-CpG-density promoters (HCP) in sperm: UP=methylated, DN=unmethylated.coexpressionCOEXPweber_methylated_hcp_in_sperm_up
img DNA methylation status of germline-specific genes with intermediate-CpG-density promoters (ICP) in sperm: UP=methylated, DN=unmethylated.coexpressionCOEXPweber_methylated_icp_in_sperm_dn
img DNA methylation status of germline-specific genes with intermediate-CpG-density promoters (ICP) in sperm: UP=methylated, DN=unmethylated.coexpressionCOEXPweber_methylated_icp_in_sperm_up
img DNA methylation status of germline-specific genes with low-CpG-density promoters (LCP) in primary fibroblasts: UP=methylated, DN=unmethylated.coexpressionCOEXPweber_methylated_lcp_in_fibroblast_dn
img DNA methylation status of germline-specific genes with low-CpG-density promoters (LCP) in primary fibroblasts: UP=methylated, DN=unmethylated.coexpressionCOEXPweber_methylated_lcp_in_fibroblast_up
img DNA methylation status of germline-specific genes with low-CpG-density promoters (LCP) in sperm: UP=methylated, DN=unmethylated.coexpressionCOEXPweber_methylated_lcp_in_sperm_up
img DNA methylation status of germline-specific genes with low-CpG-density promoters (LCP) in sperm: UP=methylated, DN=unmethylated.coexpressionCOEXPweber_methylated_lcp_in_sperm_dn
img DNA repair and replication genes down-regulated in melanoma patients who will relapse vs patients who will not.coexpressionCOEXPkauffmann_melanoma_relapse_dn
img DNA repair and replication genes up-regulated in melanoma patients who will relapse vs patients who will not.coexpressionCOEXPkauffmann_melanoma_relapse_up
img DNA repair genes whose promoters contain putative ZNF143 [Gene ID=7702] binding sites.coexpressionCOEXPwakasugi_have_znf143_binding_sites
img DNA replication genes up-regulated in a Rat-1a cell line (fibroblast) by expression of E2F1 [Gene ID=1869].coexpressionCOEXPkalma_e2f1_targets
img Delayed early genes (DEG) which are coordinately down-regulated in multiple epithelial tumor types.coexpressionCOEXPamit_delayed_early_genes
img Differentially expressed genes 6 hr after tinduction of HoxA5 [Gene ID=3205] expression in a breast cancer cell line.coexpressionCOEXPchen_hoxa5_targets_6hr_dn
img Differentially expressed genes 6 hr after tinduction of HoxA5 [Gene ID=3205] expression in a breast cancer cell line.coexpressionCOEXPchen_hoxa5_targets_6hr_up
img Differentially expressed genes 9 hr after tinduction of HoxA5 [Gene ID=3205] expression in a breast cancer cell line.coexpressionCOEXPchen_hoxa5_targets_9hr_up
img Differentially expressed genes 9 hr after tinduction of HoxA5 [Gene ID=3205] expression in a breast cancer cell line.coexpressionCOEXPchen_hoxa5_targets_9hr_dn
img Differentially expressed genes between high vs low ZAP70 [Gene ID=7535] acute lymphoblastic leukemia (ALL) cases with no known molecular aberrations.coexpressionCOEXPchiaretti_acute_lymphoblastic_leukemia_zap70
img Differentially expressed genes in a panel of xenografts representing 8 common pediatric tumors compared to the normal tissues.coexpressionCOEXPwhiteford_pediatric_cancer_markers
img Differentially expressed genes relevant to pathogenesis of cutaneous T cell lymphoma (CTCL).coexpressionCOEXPhahtola_ctcl_pathogenesis
img Differentiation markers for normal alveolar epithelium cells.coexpressionCOEXPnakamura_alveolar_epithelium
img Differentiation markers for normal bronchiolar and bronchial epithelial cells.coexpressionCOEXPnakamura_bronchial_and_bronchiolar_epithelia
img Direct targets of IRF4 [Gene ID=3662] that constitute a multiple myeloma program.coexpressionCOEXPshaffer_irf4_multiple_myeloma_program
img Down-regualted genes from the set F (Fig. 5a): specific signature shared by cells expressing AF4-MLL [Gene ID=4299, 4297] alone and those expressing both AF4-MLL and MLL-AF4 fusion proteins.coexpressionCOEXPgaussmann_mll_af4_fusion_targets_f_dn
img Down-regulated at 24 h following infection of primary human foreskin fibroblasts with CMVcoexpressionCOEXPzhu_cmv_24_hr_dn
img Down-regulated at 8 h following infection of primary human foreskin fibroblasts with CMVcoexpressionCOEXPzhu_cmv_8_hr_dn
img Down-regulated at any timepoint following infection of primary human foreskin fibroblasts with CMVcoexpressionCOEXPzhu_cmv_all_dn
img Down-regulated genes associated with poor survival prognosis of patients with metastatic neuroblastoma that lack MYCN [Gene ID=4613] amplification.coexpressionCOEXPasgharzadeh_neuroblastoma_poor_survival_dn
img Down-regulated genes associated with sensitivity and resistance to gamma-secretase (GSI) in T-cell acute lymphoblastic leukemia (T-ALL) cell lines.coexpressionCOEXPpalomero_gsi_sensitivity_dn
img Down-regulated genes associated with the acquision of metastatic potential in LNM35 cells (large cell lung cancer).coexpressionCOEXPtomida_metastasis_dn
img Down-regulated genes characteristic for autonomous thyroid adenoma.coexpressionCOEXPwattel_autonomous_thyroid_adenoma_dn
img Down-regulated genes common to all pretumorigenic cells with acquired drug resistance.coexpressionCOEXPyague_pretumor_drug_resistance_dn
img Down-regulated genes constituting the molecular signature of Burkitt 's lymphoma.coexpressionCOEXPhummel_burkitts_lymphoma_dn
img Down-regulated genes detecting gender effects in global expression profiling studies.coexpressionCOEXPrunne_gender_effect_dn
img Down-regulated genes discriminating between MSI (microsatellite instability) and MSS (microsatellite stability) colon cancers.coexpressionCOEXPwatanabe_colon_cancer_msi_vs_mss_dn
img Down-regulated genes displaying alternative splicing in MDA-MB-435 cells (breast cancer) whose metastatic potential has been reduced by expression of NME1 [Gene ID=4830].coexpressionCOEXPlee_metastasis_and_alternative_splicing_dn
img Down-regulated genes distinguishing between early gastric cancer (EGC) and normal tissue samples.coexpressionCOEXPvecchi_gastric_cancer_early_dn
img Down-regulated genes distinguishing between two groups of non-BRCA1/BRCA2 [Gene ID=672, 675] breast tumors (BRACx): group A vs group B.coexpressionCOEXPhedenfalk_breast_cancer_bracx_dn
img Down-regulated genes distinguishing between two subtypes of gastric cancer: advanced (AGC) and early (EGC).coexpressionCOEXPvecchi_gastric_cancer_advanced_vs_early_dn
img Down-regulated genes distinguishing hepatocellular carcinoma (HCC) samples positive for EPCAM [Gene ID=4072] from the negative ones.coexpressionCOEXPyamashita_liver_cancer_with_epcam_dn
img Down-regulated genes from the 70-gene prognosis predictor for stage 2 colon cancer, based on non-neoplastic mucosa gene expression profiles.coexpressionCOEXPbarrier_colon_cancer_recurrence_dn
img Down-regulated genes from the optimal set of 100 markers discriminating ER(-) breast cancer tumors by BRCA1 [Gene ID=672] mutation status.coexpressionCOEXPvantveer_breast_cancer_brca1_dn
img Down-regulated genes from the optimal set of 550 markers discriminating breast cancer samples by ESR1 [Gene ID=2099] expression: ER(+) vs ER(-) tumors.coexpressionCOEXPvantveer_breast_cancer_esr1_dn
img Down-regulated genes from the set B (Fig. 5a): specific signature shared by cells expressing either AF4-MLL or MLL-AF4 [Gene ID=4299, 4297] fusion proteins.coexpressionCOEXPgaussmann_mll_af4_fusion_targets_b_dn
img Down-regulated genes from the set D (Fig. 5a): specific signature shared by cells expressing MLL-AF4 [Gene ID=4297, 4299] alone and those expressing both MLL-AF4 and AF4-MLL fusion proteins.coexpressionCOEXPgaussmann_mll_af4_fusion_targets_d_dn
img Down-regulated genes from the set E (Fig. 5a): specific signature shared by cells expressing either MLL-AF4 [Gene ID=4297, 4299] or AF4-MLL fusion proteins alone, and those expressing both fusion proteins.coexpressionCOEXPgaussmann_mll_af4_fusion_targets_e_dn
img Down-regulated genes from the set G (Fig. 5a): specific to cells expressing both MLL-AF4 [Gene ID=4297, 4299] and AF4-MLL fusion proteins.coexpressionCOEXPgaussmann_mll_af4_fusion_targets_g_dn
img Down-regulated genes highly correlated with acute lymphoblastic leukemia (ALL) vs acute myeloid leukemia (AML).coexpressionCOEXPgolub_all_vs_aml_dn
img Down-regulated genes in B-CLL (B-cell chronic leukemia) patients expressing high levels of ZAP70 and CD38 [Gene ID=7535, 952], which are associated with poor survival.coexpressionCOEXPhuttmann_b_cll_poor_survival_dn
img Down-regulated genes in Calu3 cells (non-small cell lung cancer, NSCLC) resistant to gemcitabine [PubChem=3461] compared to the parental line sensitive to the drug.coexpressionCOEXPtooker_gemcitabine_resistance_dn
img Down-regulated genes in Calu3 cells (non-small lung cancer cells, NSCLC) resitant to gemcitabine [PubChem=3461] in response to bexarotene [PubChem=82146].coexpressionCOEXPtooker_response_to_bexarotene_dn
img Down-regulated genes in HepG2 cells (liver cancer) overexpressing an oncogenic variant of tumor suppressor TIP30 [Gene ID=10553] compared to its wild type form.coexpressionCOEXPjiang_tip30_targets_dn
img Down-regulated genes in MDA-MB-435 cells (breast cancer) undergoing G2/M arrest after treatment with 2-methoxyestradiol (2ME2) [PubChem=1573].coexpressionCOEXPbhati_g2m_arrest_by_2methoxyestradiol_dn
img Down-regulated genes in MM1.S cells (multiple myeloma) treated with adaphostin [PubChem=387042], a tyrosine kinase inhibitor with anticancer properties.coexpressionCOEXPpodar_response_to_adaphostin_dn
img Down-regulated genes in U87 cells (glioblastoma multiforme, GBM) engineered to stably express LGI1 [Gene ID=9211].coexpressionCOEXPpiepoli_lgi1_targets_dn
img Down-regulated genes in angioimmunoblastic lymphoma (AILT) compared to normal T lymphocytes.coexpressionCOEXPpiccaluga_angioimmunoblastic_lymphoma_dn
img Down-regulated genes in both rectal and colon carcinoma compared to normal mucosa samples.coexpressionCOEXPgrade_colon_and_rectal_cancer_dn
img Down-regulated genes in cervical carcinoma and head and neck tumors positive for human papilloma virus (HPV) compared to those negative for HPV.coexpressionCOEXPpyeon_hpv_positive_tumors_dn
img Down-regulated genes in colon carcinoma tumors compared to the matched normal mucosa samples.coexpressionCOEXPgrade_colon_cancer_dn
img Down-regulated genes in colon carcinoma tumors with lymph node metastases.coexpressionCOEXPgrade_metastasis_dn
img Down-regulated genes in head and neck cancer compared to cervical carcinoma samples.coexpressionCOEXPpyeon_cancer_head_and_neck_vs_cervical_dn
img Down-regulated genes in hepatocellular carcinoma (HCC) subclass G123, defined by unsupervised clustering.coexpressionCOEXPboyault_liver_cancer_subclass_g123_dn
img Down-regulated genes in hepatocellular carcinoma (HCC) subclass G1, defined by unsupervised clusteringcoexpressionCOEXPboyault_liver_cancer_subclass_g1_dn
img Down-regulated genes in hepatocellular carcinoma (HCC) subclass G12, defined by unsupervised clusteringcoexpressionCOEXPboyault_liver_cancer_subclass_g12_dn
img Down-regulated genes in hepatocellular carcinoma (HCC) subclass G23, defined by unsupervised clustering.coexpressionCOEXPboyault_liver_cancer_subclass_g23_dn
img Down-regulated genes in hepatocellular carcinoma (HCC) subclass G3, defined by unsupervised clustering.coexpressionCOEXPboyault_liver_cancer_subclass_g3_dn
img Down-regulated genes in hepatocellular carcinoma (HCC) subclass G5, defined by unsupervised clustering.coexpressionCOEXPboyault_liver_cancer_subclass_g5_dn
img Down-regulated genes in hepatocellular carcinoma (HCC) subclass G56, defined by unsupervised clustering.coexpressionCOEXPboyault_liver_cancer_subclass_g56_dn
img Down-regulated genes in hepatocellular carcinoma (HCC) subclass G6, defined by unsupervised clustering.coexpressionCOEXPboyault_liver_cancer_subclass_g6_dn
img Down-regulated genes in lung tissue of smokers with chronic obstructive pulmonary disease (COPD) vs smokers without disease (GOLD-2 vs GOLD-0).coexpressionCOEXPning_chronic_obstructive_pulmonary_disease_dn
img Down-regulated genes in melanoma tumors that developed metastatic disease compared to primary melanoma that did not.coexpressionCOEXPalonso_metastasis_dn
img Down-regulated genes in metastatic vs primary solid tumors.coexpressionCOEXPramaswamy_metastasis_dn
img Down-regulated genes in non-neoplastic mucosa samples from colon cancer patients who developed recurrence of the disease.coexpressionCOEXPbarrier_cancer_relapse_normal_sample_dn
img Down-regulated genes in pediatric adrenocortical carcinoma (ACC) compared to the adenoma (ACA) tumors.coexpressionCOEXPwest_adrenocortical_carcinoma_vs_adenoma_dn
img Down-regulated genes in pediatric adrenocortical tumors (ACT) compared to the normal tissue.coexpressionCOEXPwest_adrenocortical_tumor_dn
img Down-regulated genes in peripheral zone of human pancreatic cancer growing in the pancreas of nude mice compared to that of the tumor from the central zone.coexpressionCOEXPnakamura_tumor_zone_peripheral_vs_central_dn
img Down-regulated genes in the breast cancer prognostic signature of 70 genes that significantly correlated with survival.coexpressionCOEXPnaderi_breast_cancer_prognosis_dn
img Down-regulated genes in the cancer progenitor (stem) cells corresponding to side population (SP) MCF7 cells (breast cancer) positive for MUC1 [Gene ID=4582].coexpressionCOEXPengelmann_cancer_progenitors_dn
img Down-regulated genes in the canonical gene expression signature of the fibroblast core serum response (CSR) defined by the Stanford group.coexpressionCOEXPchang_core_serum_response_dn
img Down-regulated genes in the expression signature of aneuploidy in uveal melanoma tumors: low vs high aneuploidy.coexpressionCOEXPehlers_aneuploidy_dn
img Down-regulated genes in the signature of adipose stromal cells (ADSC) immortalized by forced expression of telomerase (TERT) [Gene ID=7015].coexpressionCOEXPkang_immortalized_by_tert_dn
img Down-regulated genes in the signature set for lymph node metastasis in head and neck squamous cell carcinoma (HNSCC).coexpressionCOEXPodonnell_metastasis_dn
img Down-regulated genes in tumor samples from colon cancer patients who developed recurrence of the disease.coexpressionCOEXPbarrier_cancer_relapse_tumor_sample_dn
img Down-regulated genes predicting poor survival of patients with thyroid carcinoma.coexpressionCOEXPmontero_thyroid_cancer_poor_survival_dn
img Down-regulated genes significantly associated with positive minimal residual disease (MRD) on day 46 after chemotherapy treatment of children with acute lymphoblastic leukemia (ALL).coexpressionCOEXPflotho_pediatric_all_therapy_response_dn
img Down-regulated genes that distinguished smokers with and without lung cancer.coexpressionCOEXPspira_smokers_lung_cancer_dn
img Down-regulated genes that separate angiogenic from non-angiogenic non-small cell lung carcinoma (NSCLC) samples.coexpressionCOEXPhu_angiogenesis_dn
img Down-regulated genes that vary between HNSCC (head and neck squamous cell carcinoma) groups formed on the basis of their level of pathological differentiation: moderately vs poorly differentiated tumors.coexpressionCOEXPrickman_tumor_differentiated_moderately_vs_poorly_dn
img Down-regulated genes that vary between HNSCC (head and neck squamous cell carcinoma) groups formed on the basis of their level of pathological differentiation: well vs moderately differentiated tumors.coexpressionCOEXPrickman_tumor_differentiated_well_vs_moderately_dn
img Down-regulated genes that vary between HNSCC (head and neck squamous cell carcinoma) groups formed on the basis of their level of pathological differentiation: well vs poorly differentiated tumors.coexpressionCOEXPrickman_tumor_differentiated_well_vs_poorly_dn
img Down-regulated genes whose expression correlated with histologic grade of invasive breast cancer tumors: comparison of grade 1 vs grade 3.coexpressionCOEXPsotiriou_breast_cancer_grade_1_vs_3_dn
img Down-regulated genes whose expression correlates with copy number losses in pancreatic adenocarcinoma cell lines and primary tumor specimens.coexpressionCOEXPaguirre_pancreatic_cancer_copy_number_dn
img Down-regulated genes whose expression is associated with amplification of the 12p11-12 chromosome in pancreatic cancer cell lines.coexpressionCOEXPheidenblad_amplicon_12p11_12_dn
img Down-regulated genes whose expression is associated with amplification of the 8q24 chromosome region in pancreatic cancer cell lines.coexpressionCOEXPheidenblad_amplicon_8q24_dn
img Down-regulated genesin the left ventricle myocardium of patients with heart failure following implantation of LVAD (left ventricular assist device).coexpressionCOEXPchen_lvad_support_of_failing_heart_dn
img Down-regulated in B lymphocytes from patients with ICF syndrom caused by mutations in DNMT3B [Gene ID=1789] compared to normals.coexpressionCOEXPehrlich_icf_syndrom_dn
img Down-regulated in CD4+ [Gene ID=920] T lymphocytes after 4 h treatment with 100 nM TSA [PubChem=5562].coexpressionCOEXPmoreira_response_to_tsa_dn
img Down-regulated in GHOST(3)CXCR4 cells (osteosarcoma) upon ectopic expression of ILF3 [Gene ID=3609].coexpressionCOEXPkrasnoselskaya_ilf3_targets_dn
img Down-regulated in MCF7 cells (breast cancer) by TLX1 (HOX11) [Gene ID=3195].coexpressionCOEXPmohankumar_tlx1_targets_dn
img Down-regulated in ovarian epithelial cells (MCV152) 72 hours following FSH treatment, compared to untreatedcoexpressionCOEXPji_response_to_fsh_dn
img Down-regulated target genes shared by acute myeloid leukemia (AML) translocation products PML RARA [Gene ID=5371, 5914], AML1 ETO [Gene ID=861, 862], and PLZF RARA [Gene ID=5914, 7704].coexpressionCOEXPmueller_common_targets_of_aml_fusions_dn
img Downregulated in the vastus lateralis muscle of aged vs young adult rhesus monkeyscoexpressionCOEXPkayo_aging_muscle_dn
img Downregulated in the vastus lateralis muscle of middle aged rhesus monkeys subjected to caloric restriction since young adulthood vs age matched controlscoexpressionCOEXPkayo_calorie_restriction_muscle_dn
img ECM related genes up-regulated early (within 30 min) in dermal fibroblasts after addition of TGFB1 [Gene ID=7040].coexpressionCOEXPverrecchia_early_response_to_tgfb1
img ECM related genes up-regulated later than 30 min following addition of TGFB1 [Gene ID=7040] in dermal fibroblasts.coexpressionCOEXPverrecchia_delayed_response_to_tgfb1
img EMT (epithelial-mesenchymal transition) genes down-regulated genes in melanoma tumous that developed metastatic disease compared to primary melanoma that did not.coexpressionCOEXPalonso_metastasis_emt_dn
img EMT (epithelial-mesenchymal transition) genes up-regulated genes in melanoma tumous that developed metastatic disease compared to primary melanoma that did not.coexpressionCOEXPalonso_metastasis_emt_up
img ES/PNET (Ewing sarcoma; primitive neuroectodermal tumors) markers up-regulated in neuroblastoma cell lines expressing ESWR1-FLI1 [Gene ID=2130, 2313] fusion protein.coexpressionCOEXProrie_targets_of_ewsr1_fli1_fusion_up
img Embryonic genes targeted by LET7A1 [Gene ID=406881] and which are up-regulated in many human cancers.coexpressionCOEXPboyerinas_oncofetal_targets_of_let7a1
img Epigenetically silenced genes up-regulated in HCT116 cells (colon cancer) hypomorphic for DICER1 [Gene ID=23405].coexpressionCOEXPting_silenced_by_dicer
img Examples of transcription factors whose activities are regulated by MAPK1 and MAPK3 [Gene ID=5594, 5595] phosphorylation.coexpressionCOEXPturjanski_mapk1_and_mapk2_targets
img Examples of transcription factors whose activities are regulated by MAPK11 [Gene ID=5600] phosphorylation.coexpressionCOEXPturjanski_mapk11_targets
img Examples of transcription factors whose activities are regulated by MAPK14 [Gene ID=1432] phosphorylation.coexpressionCOEXPturjanski_mapk14_targets
img Examples of transcription factors whose activities are regulated by MAPK7 [Gene ID=5598] phosphorylation.coexpressionCOEXPturjanski_mapk7_targets
img Examples of transcription factors whose activities are regulated by MAPK8 and MAPK9 [Gene ID=5599, 5601].coexpressionCOEXPturjanski_mapk8_and_mapk9_targets
img Experimentally validated direct targets of MIR192 [Gene ID=406967] microRNA; MIR192 caused cell cycle arrest in HCT116 cells (colon cancer).coexpressionCOEXPgeorges_cell_cycle_mir192_targets
img FARMER_BREAST_CANCER_APOCRINE VS LUMINALcoexpressionCOEXPfarmer_breast_cancer_apocrine vs luminal
img Fibroblast serum response genes showing periodic expression during the cell cycle; excluded from the core serum response signature.coexpressionCOEXPchang_cycling_genes
img Fig.5, Supplementary Fig.2 Genes overexpressed in human hepatocellular carcinoma with hepatoblast propertycoexpressionCOEXPlee_liver_cancer_hepatoblast
img G1 to S phase regulators significantly changed in DanG cells (pancreatic cancer) treated with Ly294002 [PubChem=3973], a phosphoinositide 3-kinase (PI3K) inhibitor.coexpressionCOEXPreichert_g1s_regulators_as_pi3k_targets
img Gamma and UV responding genes.coexpressionCOEXPkyng_dna_damage_by_gamma_and_uv_radiation
img Gene changed by CD40 [Gene ID=958] signaling in Ramos cells (EBV negative Burkitt lymphoma).coexpressionCOEXPbasso_cd40_signaling_up
img Gene changed by CD40 [Gene ID=958] signaling in Ramos cells (EBV negative Burkitt lymphoma).coexpressionCOEXPbasso_cd40_signaling_dn
img Gene expression signature of vascular invasion of hepatocellular carcinoma (HCC).coexpressionCOEXPho_liver_cancer_vascular_invasion
img Gene in the opposite directions by v-MYB (DN) and c-MYB (UP) variants of CMYB [Gene ID=4602] overexpressed in primary monocyte cultures off adenoviral vectors.coexpressionCOEXPliu_targets_of_vmyb_vs_cmyb_dn
img Gene in the opposite directions by v-MYB (UP) and c-MYB (DN) variants of CMYB [Gene ID=4602] overexpressed in primary monocyte cultures off adenoviral vectors.coexpressionCOEXPliu_targets_of_vmyb_vs_cmyb_up
img Gene predicting resistance of the NCI-60 cell lines to gamma radiation.coexpressionCOEXPamundson_gamma_radiation_resistance
img Genes down-regulated in microdissected endothelial samples from ovarian cancer tumors with tumor-infiltrating lymphocytes (TIL) vs those without TILs.coexpressionCOEXPbuckanovich_t_lymphocyte_homing_on_tumor_dn
img Genes able to induce cell death in an expression cDNA library screen.coexpressionCOEXPalcala_apoptosis
img Genes abnormally regulated in response to CD40L and IL4 [Gene ID=959, 3565] stimulation of B lymphocytes from patients with a hypomorphic mutation of IKBKG [Gene ID=8517].coexpressionCOEXPjain_nfkb_signaling
img Genes affected by epigenetic aberrations in prostate cancer.coexpressionCOEXPli_prostate_cancer_epigenetic
img Genes amplified and up-regulated more than twofold in at least two out of 10 pancreatic cancer cell lines studied.coexpressionCOEXPheidenblad_amplified_in_pancreatic_cancer
img Genes associated with clinical prognosis of pediatric AML (acute myeloid leukemia): good prognosis=no relapse > 3 years; poor prognosis=relapse < 1 year or no response to therapy.coexpressionCOEXPyagi_aml_relapse_prognosis
img Genes associated with metastasis of breast cancer in the lung compared to the non-lung metastasis.coexpressionCOEXPlandemaine_lung_metastasis
img Genes associated with migration rate of 40 human bladder cancer cells.coexpressionCOEXPwu_cell_migration
img Genes bearing H3K27me3 mark or whose promoters are bound by the polycomb proteins SUZ12 or EED [Gene ID=23512, 8726]; their DNA is methylated de novo in cancer.coexpressionCOEXPschlesinger_methylated_de_novo_in_cancer
img Genes bearing the H3K27me3 mark in normal cells; their DNA is methylated in cancer cells.coexpressionCOEXPschlesinger_h3k27me3_in_normal_and_methylated_in_cancer
img Genes both mutated and amplified in a panel of 191 breast tumor samples.coexpressionCOEXPnikolsky_mutated_and_amplified_in_breast_cancer
img Genes bound by EWSR1-FLT1 [Gene ID=2130, 2321] fusion and whose expression changed in STA-ET-7.2 cells (Ewing's sarcoma) after knockdown of EWSR1-FLT1 by RNAi.coexpressionCOEXPsiligan_targets_of_ews_fli1_fusion_dn
img Genes bound by EWSR1-FLT1 [Gene ID=2130, 2321] fusion and whose expression changed in STA-ET-7.2 cells (Ewing's sarcoma) after knockdown of EWSR1-FLT1 by RNAi.coexpressionCOEXPsiligan_targets_of_ews_fli1_fusion_up
img Genes bound by EWSR1-FLT1 [Gene ID=2130, 2321] fusion but whose expression did not change in STA-ET-7.2 cells (Ewing's sarcoma) after knockdown of EWSR1-FLT1 by RNAi.coexpressionCOEXPsiligan_bound_by_ews_flt1_fusion
img Genes changed after DNA damage in cell lines from young donors, and that had a GO annotation.coexpressionCOEXPkyng_dna_damage_dn
img Genes changed after DNA damage in cell lines from young donors, and that had a GO annotation.coexpressionCOEXPkyng_dna_damage_up
img Genes changed in DU-145 cells (prostate cancer) in the absence but not presence of a dominant negative form of AKT1 [Gene ID=207] upon exposure to HGF [Gene ID=3082] for 6 hr.coexpressionCOEXPxu_hgf_targets_induced_by_akt1_6hr
img Genes changed in H1299 cells (non-small cell lung cancer, NSCLC) transiently transfected to express the TP63 [Gene ID=8626] gamma splice variant.coexpressionCOEXPkommagani_tp63_gamma_targets
img Genes changed in HBE cells (bronchial epithelium) after treatment with IL22 [Gene ID=50616] and IL17A [Gene ID=3605].coexpressionCOEXPaujla_il22_and_il17a_signaling
img Genes changed in HMLE cells (mmortalized nontransformed mammary epithelium) after RNAi knockdown of both CDH1 [Gene ID=999] and CTNNB1 [Gene ID=1499], compared to the knockdown of CDH1 alone.coexpressionCOEXPonder_cdh1_signaling_via_ctnnb1
img Genes changed in INA-6 cells (multiple myeloma, MM) by re-addition of IL6 [Gene ID=3569] after its initial withdrawal for 12h.coexpressionCOEXPbrocke_apoptosis_reversed_by_il6
img Genes changed in MGUS (monoclonal gammopathy of undetermined significance) compared to PCL (plasma cell leukemia) samples.coexpressionCOEXPmattioli_mgus_vs_pcl
img Genes changed in U373-MG cells (malignant glioma) upon treatment with arsenic trioxide [PubChem=14888], a chemical that can cause autophagic cell death.coexpressionCOEXPkan_response_to_arsenic_trioxide
img Genes changed in acute myeloid leukemia (AML) with respect to cellular localization of NPM1 [Gene ID=4869]: cytoplasmic vs. nucleolar.coexpressionCOEXPalcalay_aml_by_npm1_localization_up
img Genes changed in acute myeloid leukemia (AML) with respect to cellular localization of NPM1 [Gene ID=4869]: cytoplasmic vs. nucleolar.coexpressionCOEXPalcalay_aml_by_npm1_localization_dn
img Genes changed in blister cells from patients with adverse drug reactions (ADR).coexpressionCOEXPchung_blister_cytotoxicity_up
img Genes changed in blister cells from patients with adverse drug reactions (ADR).coexpressionCOEXPchung_blister_cytotoxicity_dn
img Genes changed in breast cancer samples according to the ESR1 [Gene ID=2099] status: ER positive vs ER negative tumors.coexpressionCOEXPdoane_breast_cancer_esr1_up
img Genes changed in breast cancer samples according to the ESR1 [Gene ID=2099] status: ER positive vs ER negative tumors.coexpressionCOEXPdoane_breast_cancer_esr1_dn
img Genes changed in meningioma samples positive for PGR [Gene ID=5241] compared to those without the receptor.coexpressionCOEXPclaus_pgr_positive_meningioma_up
img Genes changed in meningioma samples positive for PGR [Gene ID=5241] compared to those without the receptor.coexpressionCOEXPclaus_pgr_positive_meningioma_dn
img Genes changed in neutrophils after activated protein C (PROC) [Gene ID=5624] vs. placebo treatment of pulmonary inflammation induced by bacterial lipopolysaccharide (LPS).coexpressionCOEXPnick_response_to_proc_treatment_dn
img Genes changed in neutrophils upon treatment with activated protein C (PROC) [Gene ID=5624] of pulmonary inflammation induced by bacterial lipopolysaccharide (LPS).coexpressionCOEXPnick_response_to_proc_treatment_up
img Genes changed in pre-B lymphoblastic leukemia cells with BCR-ABL1 fusion [Gene ID=613, 25] vs normal pre-B lymphocytes.coexpressionCOEXPklein_targets_of_bcr_abl1_fusion
img Genes changed in prostate cancer: androgen independent vs androgen dependent samples.coexpressionCOEXPwang_prostate_cancer_androgen_independent
img Genes changed in retinoblastoma tumors with respect to chromosome 6p amplifications.coexpressionCOEXPgrasemann_retinoblastoma_with_6p_amplification
img Genes changed in samples from B-CLL (B-cell chronic lymphocytic leukemia) using the immunoglobulin heavy chain VH3-21 gene.coexpressionCOEXPfaelt_b_cll_with_vh3_21_dn
img Genes changed in samples from B-CLL (B-cell chronic lymphocytic leukemia) using the immunoglobulin heavy chain VH3-21 gene.coexpressionCOEXPfaelt_b_cll_with_vh3_21_up
img Genes changed in the B cell chronic lymphocytic leukemia (B-CLL) with deletions in the 6q21 region.coexpressionCOEXPhaslinger_b_cll_with_6q21_deletion
img Genes changed in the B cell chronic lymphocytic leukemia (B-CLL) with deletions in the 11q23 region.coexpressionCOEXPhaslinger_b_cll_with_11q23_deletion
img Genes changed in the B cell chronic lymphocytic leukemia (B-CLL) with deletions in the 13q14 region.coexpressionCOEXPhaslinger_b_cll_with_13q14_deletion
img Genes changed in the B cell chronic lymphocytic leukemia (B-CLL) with deletions in the 17p13 region.coexpressionCOEXPhaslinger_b_cll_with_17p13_deletion
img Genes changed in the B cell chronic lymphocytic leukemia (B-CLL) with mutations in the variable immunoglobulin veriable heavy chain (VH) genes.coexpressionCOEXPhaslinger_b_cll_with_mutated_vh_genes
img Genes changed in the B cell chronic lymphocytic leukemia (B-CLL) with trisomy of chromosome 12.coexpressionCOEXPhaslinger_b_cll_with_chromosome_12_trisomy
img Genes changed in xenograft tumors formed by DLD-1 or DKO-4 cells (colon cancer) overexpressing MET [Gene ID=4233].coexpressionCOEXPseiden_oncogenesis_by_met
img Genes changed more than 7-fold by expressing JAK2 [Gene ID=3717] in the JAK2 null cell line.coexpressionCOEXPwallace_jak2_targets_up
img Genes changed similarly in DU-145 cells (prostate cancer) in the absence and presence of a dominant negative form of AKT1 [Gene ID=207] upon exposure to HGF [Gene ID=3082] for 6 hr.coexpressionCOEXPxu_hgf_signaling_not_via_akt1_6hr
img Genes co-amplified within MYCN [Gene ID=4613] in primary neuroblastoma tumors.coexpressionCOEXPlastowska_coamplified_with_mycn
img Genes commonly down-regulated in CD-1 and CD-2 clusters of multiple myeloma samples and which were higher expressed in the CD-1 group.coexpressionCOEXPzhan_multiple_myeloma_cd1_and_cd2_dn
img Genes commonly down-regulated in SK-N-BE cells (neuroblastoma) after RNAi knockdown of CCND1 and CDK4 [Gene ID=595, 1019].coexpressionCOEXPmolenaar_targets_of_ccnd1_and_cdk4_dn
img Genes commonly down-regulated in human alveolar rhabdomyosarcoma (ARMS) and its mouse model overexpressing PAX3-FOXO1 [Gene ID=5077, 2308] fusion.coexpressionCOEXPren_alveolar_rhabdomyosarcoma_dn
img Genes commonly up-regulated in CD-1 and CD-2 clusters of multiple myeloma samples and which were higher expressed in the CD-1 group.coexpressionCOEXPzhan_multiple_myeloma_cd1_and_cd2_up
img Genes commonly up-regulated in SK-N-BE cells (neuroblastoma) after RNAi knockdown of CCND1 and CDK4 [Gene ID=595, 1019].coexpressionCOEXPmolenaar_targets_of_ccnd1_and_cdk4_up
img Genes commonly up-regulated in cancer relative to normal tissue, according to the meta-analysis of the OncoMine gene expression database.coexpressionCOEXPrhodes_cancer_meta_signature
img Genes commonly up-regulated in human alveolar rhabdomyosarcoma (ARMS) and its mouse model overexpressing PAX3-FOXO1 [Gene ID=5077, 2308] fusion.coexpressionCOEXPren_alveolar_rhabdomyosarcoma_up
img Genes commonly up-regulated in undifferentiated cancer relative to well-differentiated cancer, based on the meta-analysis of the OncoMine gene expression database.coexpressionCOEXPrhodes_undifferentiated_cancer
img Genes consistently down-regulated in ACRP cells (ovarian cancer, resistant to cisplatin [PubChem=2767]) compared to the parental sensitive A2780 cells, regardless of cisplatin exposure.coexpressionCOEXPli_cisplatin_resistance_dn
img Genes consistently down-regulated in HMEC cells (primary mammary epithelium) upon expression of TERT [Gene ID=7015] off a retroviral vector.coexpressionCOEXPsmith_tert_targets_dn
img Genes consistently up-regulated in ACRP cells (ovarian cancer, resistant to cisplatin [PubChem=2767]) compared to the parental sensitive A2780 cells, regardless of cisplatin exposure.coexpressionCOEXPli_cisplatin_resistance_up
img Genes consistently up-regulated in HMEC cells (primary mammary epithelium) upon expression of TERT [Gene ID=7015] off a retroviral vector.coexpressionCOEXPsmith_tert_targets_up
img Genes constituting the ATM-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient, PCC >= 0.4) with that of ATM [Gene ID=472] across a compendium of normal tissues.coexpressionCOEXPpujana_atm_pcc_network
img Genes constituting the BRCA-centered network (BCN).coexpressionCOEXPpujana_brca_centered_network
img Genes constituting the BRCA1-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient, PCC >= 0.4) with that of BRCA1 [Gene ID=672] across a compendium of normal tissues.coexpressionCOEXPpujana_brca1_pcc_network
img Genes constituting the BRCA2-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient, PCC >= 0.4) with that of BRCA2 [Gene ID=675] across a compendium of normal tissues.coexpressionCOEXPpujana_brca2_pcc_network
img Genes constituting the CHEK2-PCC network of transcripts whose expression positively correlates (Pearson correlation coefficient, PCC >= 0.4) with that of CHEK2 [Gene ID=11200].coexpressionCOEXPpujana_chek2_pcc_network
img Genes constituting the LIT-Int network of proteins interacting with breast cancer reference proteins BRCA1, BRCA2, ATM, and CHEK2 [Gene ID=672, 675, 472, 11200]; the interactions were manually curated from the literature.coexpressionCOEXPpujana_breast_cancer_lit_int_network
img Genes constituting the PluriNet protein-protein network shared by the pluripotent cells (embryonic stem cells, embryonical carcinomas and induced pluripotent cells).coexpressionCOEXPmueller_plurinet
img Genes constituting the XPRSS-Int network: intersection of genes whose expression correlates with BRCA1, BRCA2, ATM, and CHEK2 [Gene ID=672, 675, 472, 11200] in a compendium of normal tissues.coexpressionCOEXPpujana_xprss_int_network
img Genes defining a 25-signal proteomic signature associated with a high risk of cancer recurrence and poor survival of NSCLC (non-small cell lung cancer) patients.coexpressionCOEXPyanagisawa_lung_cancer_recurrence
img Genes differentially expressed in hereditary breast cancer tumors with mutated BRCA1 [Gene ID=672] compared to those with mutated BRCA2 [Gene ID=675].coexpressionCOEXPhedenfalk_breast_cancer_brca1_vs_brca2
img Genes differentially expressed in kidney biopsies from patients with acute transplant rejection compared to the biopsies from patients with well functioning kidneys more than 1-year post transplant.coexpressionCOEXPflechner_biopsy_kidney_transplant_rejected_vs_ok_dn
img Genes differentially expressed in kidney biopsies from patients with acute transplant rejection compared to the biopsies from patients with well functioning kidneys more than 1-year post transplant.coexpressionCOEXPflechner_biopsy_kidney_transplant_rejected_vs_ok_up
img Genes differentially expressed in multiple myeloma (MM) patients: comparison of MGUS-like vs PCL-like samples; MGUS=monoclonal gammopathy of undetermined significance, PCL=plasma cell leukemia.coexpressionCOEXPmattioli_multiple_myeloma_subgroups
img Genes differentially expressed in pediatric AML (acute myeloid leukemia) samples from patients with good survival (>3 years without relapse) compared to those with poor survival (relapsed within one year after treatment).coexpressionCOEXPyagi_aml_survival
img Genes differentialy expressed in gastric cancer cell lines: doxorubicin [PubChem=31703] resistant vs sensitive.coexpressionCOEXPkang_doxorubicin_resistance_dn
img Genes differentialy expressed in gastric cancer cell lines: doxorubicin [PubChem=31703] resistant vs sensitive.coexpressionCOEXPkang_doxorubicin_resistance_up
img Genes diffierentially expressed in kidney biopsies from patients with well functioning kidneys more than 1-year post transplant compared to the biopsies from normal living kidney donors.coexpressionCOEXPflechner_biopsy_kidney_transplant_ok_vs_donor_up
img Genes diffierentially expressed in kidney biopsies from patients with well functioning kidneys more than 1-year post transplant compared to the biopsies from normal living kidney donors.coexpressionCOEXPflechner_biopsy_kidney_transplant_ok_vs_donor_dn
img Genes diffierentially expressed in peripheral blood lymphocytes (PBL) from patients with acute transplant rejection compared to those from patients with well functioning kidneys more than 1-year post transplant.coexpressionCOEXPflechner_pbl_kidney_transplant_rejected_vs_ok_dn
img Genes diffierentially expressed in peripheral blood lymphocytes (PBL) from patients with acute transplant rejection compared to those from patients with well functioning kidneys more than 1-year post transplant.coexpressionCOEXPflechner_pbl_kidney_transplant_rejected_vs_ok_up
img Genes directly down-regulated by CD44 [Gene ID=960] stimulation of B lymphocytes.coexpressionCOEXPhoegerkorp_cd44_targets_direct_dn
img Genes directly up-regulated by CD44 [Gene ID=960] stimulation of B lymphocytes.coexpressionCOEXPhoegerkorp_cd44_targets_direct_up
img Genes discriminating TP53 [Gene ID=7157] status across various genotoxic stress agents.coexpressionCOEXPamundson_dna_damage_response_tp53
img Genes discriminating genotoxic (DNA damaging) agents from other kinds of stresses.coexpressionCOEXPamundson_genotoxic_signature
img Genes discriminating responses to sodium arsenite [PubChem ID=26435] from other stresses.coexpressionCOEXPamundson_response_to_arsenite
img Genes distinguishing between MGUS (monoclonal gammopathy of undetermined significance) and multiple myeloma (MM) samples.coexpressionCOEXPmattioli_mgus_vs_multiple_myeloma
img Genes distinguishing between breast cancer tumors bearing mutations in BRCA1 [Gene ID=672] and those with mutated BRCA2 [Gene ID=675].coexpressionCOEXPhonrado_breast_cancer_brca1_vs_brca2
img Genes distinguishing between sporadic breast cancer tumors and hereditary breast cancer tumors that have mutated BRCA1 and BRCA2 [Gene ID=672, 675].coexpressionCOEXPhedenfalk_breast_cancer_hereditary_vs_sporadic
img Genes distinguishing in multiple myeloma (MM) samples with higher expression of TACI [Gene ID=23495].coexpressionCOEXPmoreaux_multiple_myeloma_by_taci_up
img Genes distinguishing in multiple myeloma (MM) samples with lower expression of TACI [Gene ID=23495].coexpressionCOEXPmoreaux_multiple_myeloma_by_taci_dn
img Genes down-regulated SUM44/LCCTam cells (breast cancer) resistant to 4-hydroxytamoxifen [PubChem=63062] relative to the parental SUM44 cells sensitive to the drug.coexpressionCOEXPriggins_tamoxifen_resistance_dn
img Genes down-regulated across the entire panel of NCI-60 cell lines in response to gamma radiation.coexpressionCOEXPamundson_gamma_radiation_response
img Genes down-regulated and displaying decreased copy number in glioblastoma samples.coexpressionCOEXPtcga_glioblastoma_copy_number_dn
img Genes down-regulated at early stages of progenitor T lymphocyte maturation compared to the late stages.coexpressionCOEXPlee_early_t_lymphocyte_dn
img Genes down-regulated between two breast carcinoma subtypes: metaplastic (MCB) and ductal (DCB).coexpressionCOEXPlien_breast_carcinoma_metaplastic_vs_ductal_dn
img Genes down-regulated both in vivo and in vitro upon activation of MET [Gene ID=4233] signaling.coexpressionCOEXPseiden_met_signaling
img Genes down-regulated by 2-methoxyestradiol (2ME2) [PubChem=1573] in the MM.1S cell line (multiple myeloma) sensitive to dexamethasone [PubChem=5743].coexpressionCOEXPchauhan_response_to_methoxyestradiol_dn
img Genes down-regulated by 3 h of euglycemic hyperinsulinemic clamp in the vastus lateralis muscle of healthy lean subjects.coexpressionCOEXProme_insulin_targets_in_muscle_dn
img Genes down-regulated by ESRRA [Gene ID=2101] only.coexpressionCOEXPstein_esrra_targets_dn
img Genes down-regulated by IL2 [Gene ID=3558] in cells derived from CD4+ [Gene ID=920] cutaneous T-cell lymphoma (CTCL).coexpressionCOEXPmarzec_il2_signaling_dn
img Genes down-regulated by MYC [Gene ID=4609], according to the MYC Target Gene Database.coexpressionCOEXPdang_regulated_by_myc_dn
img Genes down-regulated by MYCN [Gene ID=4613] but not by its transactivation-defficient, trunkated form N-Myc-delta-73.coexpressionCOEXPcowling_mycn_targets
img Genes down-regulated by POU5F1 [Gene ID=5460] in bladder cancer cell lines.coexpressionCOEXPchang_pou5f1_targets_dn
img Genes down-regulated by RUNX1-RUNX1T1 [Gene ID=861, 862] fusion protein in normal hematopoietic progenitors; their expression was sustained in subsequently developing erythroid lineage.coexpressionCOEXPtonks_targets_of_runx1_runx1t1_fusion_sustainded_in_erythrocyte_dn
img Genes down-regulated by RUNX1-RUNX1T1 [Gene ID=861, 862] fusion protein in normal hematopoietic progenitors; their expression was sustained in subsequently developing granulocytes.coexpressionCOEXPtonks_targets_of_runx1_runx1t1_fusion_sustained_in_granulocyte_dn
img Genes down-regulated by RUNX1-RUNX1T1 [Gene ID=861, 862] fusion protein in normal hematopoietic progenitors; their expression was sustained in subsequently developing monocytes.coexpressionCOEXPtonks_targets_of_runx1_runx1t1_fusion_sustained_in_monocyte_dn
img Genes down-regulated by UV-irradiation in cervical cancer cells after knockdown of CDKN2A [Gene ID=1029].coexpressionCOEXPlau_apoptosis_cdkn2a_dn
img Genes down-regulated by estradiol [PubChem=5757] and down-regulated by ESRRA [Gene ID=2101] in MCF-7 cells (breast cancer).coexpressionCOEXPstein_esrra_targets_responsive_to_estrogen_dn
img Genes down-regulated by expression of HBV X protein (HBVgp3) [Gene ID=944566] both in SK-Hep-1 cells (hepatocellular carcinoma) and normal primary hepatocytes.coexpressionCOEXPwu_hbx_targets_3_dn
img Genes down-regulated by expression of HBV X protein (HBVgp3) [Gene ID=944566] in SK-Hep-1 cells (hepatocellular carcinoma).coexpressionCOEXPwu_hbx_targets_1_dn
img Genes down-regulated by expression of HBV X protein (HBVgp3) [Gene ID=944566] in primary hepatocytes.coexpressionCOEXPwu_hbx_targets_2_dn
img Genes down-regulated by flavopiridol [PubChem=5287969] in the HCT116 cells (colon cancer) depending on their TP53 [Gene ID=7157] status: wild-type vs loss of the gene's function (LOF).coexpressionCOEXPambrosini_flavopiridol_treatment_tp53
img Genes down-regulated by trabectedin [PubChem=3199] and its synthetic analog phthalascidin Pt 650 in HCT116 cells (colon cancer).coexpressionCOEXPmartinez_response_to_trabectedin
img Genes down-regulated during in vitro maturation of CD14+ [Gene ID=929] monocytes (day 0) into immature (day 7) and mature dendritic cells (day 14).coexpressionCOEXPlenaour_dendritic_cell_maturation_dn
img Genes down-regulated during the course of maturation of monocyte-derived dendritic cells (DC) in response to inflammatory stimuli (cluster D).coexpressionCOEXPlindstedt_dendritic_cell_maturation_d
img Genes down-regulated during transition from G1 (well differentiated tumor, infected with HCV) to G2 (moderately differentiated tumor, infected with HCV) in the development of hepatocellular carcinoma.coexpressionCOEXPiizuka_liver_cancer_progression_g1_g2_dn
img Genes down-regulated during transition from G2 (moderately differentiated tumor, infected with HCV) to G3 (poorly differentiated tumor, infected with HCV) in the development of hepatocellular carcinoma.coexpressionCOEXPiizuka_liver_cancer_progression_g2_g3_dn
img Genes down-regulated during transition from L0 (non-tumor, not infected with HCV) to L1 (non-tumor, infected with HCV) in the development of hepatocellular carcinoma.coexpressionCOEXPiizuka_liver_cancer_progression_l0_l1_dn
img Genes down-regulated during transition from L1 (non-tumor, infected with HCV) to G1 (well differentiated tumor, infected with HCV) in the development of hepatocellular carcinoma.coexpressionCOEXPiizuka_liver_cancer_progression_l1_g1_dn
img Genes down-regulated early in HMEC cells (mammary epithelium) during acinar development in vitro.coexpressionCOEXPfournier_acinar_development_early_dn
img Genes down-regulated in tumor-conditioned vs quiescent endothelial cells and up-regulated upon treatment with decitabine and TSA [PubChem=451668, 5562].coexpressionCOEXPhellebrekers_silenced_during_tumor_angiogenesis
img Genes down-regulated in 293 cells (embryonic kidney) expressing the polymorphic variant I624M (SNP ID=rs11556379] of BMYB [Gene ID=4605].coexpressionCOEXPschwab_targets_of_bmyb_i624m_dn
img Genes down-regulated in 293 cells (embryonic kidney) expressing the polymorphic variant S427G [SNP ID=rs2070235] of BMYB [Gene ID=4605].coexpressionCOEXPschwab_targets_of_bmyb_s427g_dn
img Genes down-regulated in 293 cells (embryonic kidney) upon expression of KHSV (Kaposi sarcoma???associated herpesvirus) microRNAs.coexpressionCOEXPsamols_targets_of_khsv_mirnas_dn
img Genes down-regulated in 3 out of 4 NSCLC cell lines (non-small cell lung cancer) after treatment with azacitidine [PubChem=9444] and TSA [PubChem=5562].coexpressionCOEXPzhong_response_to_azacitidine_and_tsa_dn
img Genes down-regulated in A172 cells (glioma, does not express MGMT [Gene ID=4255]) by carmustine [PubChem=2578] at 24 h.coexpressionCOEXPbandres_response_to_carmustin_without_mgmt_24hr_dn
img Genes down-regulated in A172 cells (glioma, does not express MGMT [Gene ID=4255]) by carmustine [PubChem=2578] at 48 h.coexpressionCOEXPbandres_response_to_carmustin_without_mgmt_48hr_dn
img Genes down-regulated in A2780 cells (ovarian carcinoma) exposed to fenretinide [PubChem=1744].coexpressionCOEXPappierto_response_to_fenretinide_dn
img Genes down-regulated in A375 and 397 cells (melanoma) by forced expression of PLZF [Gene ID=7704] off adenovirus vector.coexpressionCOEXPshiraishi_plzf_targets_dn
img Genes down-regulated in A4573 cells (Ewing's sarcoma, ESFT) after knockdown of BMI1 [Gene ID=648] by RNAi.coexpressionCOEXPdouglas_bmi1_targets_dn
img Genes down-regulated in A549 cells (lung cancer) after RNAi knockdown of activated KRAS [Gene ID=3845].coexpressionCOEXPsweet_kras_targets_dn
img Genes down-regulated in A549 cells (lung cancer) after knockdown of ATF4 [Gene ID=468] by RNAi.coexpressionCOEXPigarashi_atf4_targets_dn
img Genes down-regulated in A549 cells (lung cancer) after treatment with AZD0530 [PubChem=10302451], a SRC [Gene ID=6714] kinase inhibitor.coexpressionCOEXPgautschi_src_signaling
img Genes down-regulated in A549 cells (lung cancer) expressing MIRLET7A3 [Gene ID=406883] microRNA off a plasmid vector.coexpressionCOEXPbrueckner_targets_of_mirlet7a3_dn
img Genes down-regulated in A549 cells (lung cancer) upon expression of ASCL1 [Gene ID=429] off a viral vector.coexpressionCOEXPosada_ascl1_targets_dn
img Genes down-regulated in A549GARS cells (lung cancer) resistant to the geldanamycin and 17-AAG [PubChem=5476289, 6440175].coexpressionCOEXPmccollum_geldanamycin_resistance_dn
img Genes down-regulated in ACC3 cells (adenoid cystic carcinoma) after knockdown of SOX4 [Gene ID=6659] by RNAi.coexpressionCOEXPpramoonjago_sox4_targets_dn
img Genes down-regulated in AIDS-related primary effusion lymphoma (PEL) samples compared to other tumor subtypes and normal B lymphocytes.coexpressionCOEXPklein_primary_effusion_lymphoma_dn
img Genes down-regulated in ALAB cells (breast cancer) upon reintroduction of SMARCA4 [Gene ID=6597] expressed off adenoviral vector.coexpressionCOEXPhendricks_smarca4_targets_dn
img Genes down-regulated in ALL (acute lymphoblastic leukemia) blasts after 1 week of treatment with glucocorticoids.coexpressionCOEXPrhein_all_glucocorticoid_therapy_dn
img Genes down-regulated in ALL (acute lymphoblastic leukemia) patients who developed t-ML (treatment related myeloid leukemia).coexpressionCOEXPbogni_treatment_related_myeloid_leukemia_dn
img Genes down-regulated in ANBL-6 cell line (multiple myeloma, MM) expressing a constantly active form of NRAS [Gene ID=4893] off a plasmid vector compared to those grown in the presence of IL6 [Gene ID=3569].coexpressionCOEXPcroonquist_nras_signaling_dn
img Genes down-regulated in ANBL-6 cell line (multiple myeloma, MM) co-cultured with bone marrow stromal cells compared to those grown in the presence of IL6 [Gene ID=3569].coexpressionCOEXPcroonquist_stromal_stimulation_dn
img Genes down-regulated in ANBL-6 cell line (multiple myeloma, MM) expressing an activated form of NRAS [Gene ID=4893] off a plasmid vector compared to those co-cultured with bone marrow stromal cells.coexpressionCOEXPcroonquist_nras_vs_stromal_stimulation_dn
img Genes down-regulated in APL (acute promyeolocytic leukemia) blasts expressing PML-RARA fusion [Gene ID=5371, 5914] compared to normal promyeloblasts.coexpressionCOEXPcasorelli_acute_promyelocytic_leukemia_dn
img Genes down-regulated in B lymphocytes from patients with primary immunodefiency syndrom.coexpressionCOEXPbohn_primary_immunodeficiency_syndrom_dn
img Genes down-regulated in B-CLL (B-cell chronic leukemia) samples expressing high levels of LPL [Gene ID=4023] compared with those expressing low levels of the gene.coexpressionCOEXPbilban_b_cll_lpl_dn
img Genes down-regulated in B-CLL (B-cell chronic lymphocytic leukemia) patients with mutated immunoglobulin variable heavy chain (VH) genes.coexpressionCOEXPfaelt_b_cll_with_vh_rearrangements_dn
img Genes down-regulated in BJAB cell line (B lymphocyte) after expression of the viral microRNA miR-K12-11 which functions as an ortholog of cellular MIR155 [Gene ID=406947].coexpressionCOEXPgottwein_targets_of_kshv_mir_k12_11
img Genes down-regulated in BJAB cells (B-lymphoma) after glucose [PubChem=206] deprivation.coexpressionCOEXPpeng_glucose_deprivation_dn
img Genes down-regulated in BJAB cells (B-lymphoma) after glutamine [PubChem=738] deprivation.coexpressionCOEXPpeng_glutamine_deprivation_dn
img Genes down-regulated in BJAB cells (B-lymphoma) after leucine [PubChem=857] deprivation.coexpressionCOEXPpeng_leucine_deprivation_dn
img Genes down-regulated in BJUB cells (B-lymphoma) in response to rapamycin [PubChem=6610346] treatment.coexpressionCOEXPpeng_rapamycin_response_dn
img Genes down-regulated in BT549 cells (breast cancer) by expression of SMARCE1 [Gene ID=6605] off a retroviral vector.coexpressionCOEXPwang_smarce1_targets_dn
img Genes down-regulated in Barrett's esophagus compared to the normal tissue.coexpressionCOEXPwang_barretts_esophagus_dn
img Genes down-regulated in BxPC3 cells (pancreatic cancer) after treatment with TNF [Gene ID=7124] or IKI-1, an inhibitor of I?B kinase (IKK).coexpressionCOEXPzhang_response_to_ikk_inhibitor_and_tnf_dn
img Genes down-regulated in C666-1 cells (nasopharyngeal carcinoma) by stable expression of RASSF1 [Gene ID=11186].coexpressionCOEXPchow_rassf1_targets_dn
img Genes down-regulated in CD-1 compared to CD-2 cluster of multiple myeloma samples.coexpressionCOEXPzhan_multiple_myeloma_cd1_vs_cd2_dn
img Genes down-regulated in CD34+ [Gene ID=947] cells isolated from bone marrow of CML (chronic myelogenous leukemia) patients, compared to those from normal donors.coexpressionCOEXPdiaz_chronic_meylogenous_leukemia_dn
img Genes down-regulated in CD34+ [Gene ID=947] hematopoetic cells by expression of NUP98-HOXA9 fusion [Gene ID=4928, 3205] off a retroviral vector at 10 days after transduction.coexpressionCOEXPtakeda_targets_of_nup98_hoxa9_fusion_10d_dn
img Genes down-regulated in CD34+ [Gene ID=947] hematopoetic cells by expression of NUP98-HOXA9 fusion [Gene ID=4928, 3205] off a retroviral vector at 16 days after transduction.coexpressionCOEXPtakeda_targets_of_nup98_hoxa9_fusion_16d_dn
img Genes down-regulated in CD34+ [Gene ID=947] hematopoetic cells by expression of NUP98-HOXA9 fusion [Gene ID=4928, 3205] off a retroviral vector at 3 days after transduction.coexpressionCOEXPtakeda_targets_of_nup98_hoxa9_fusion_3d_dn
img Genes down-regulated in CD34+ [Gene ID=947] hematopoetic cells by expression of NUP98-HOXA9 fusion [Gene ID=4928, 3205] off a retroviral vector at 8 days after transduction.coexpressionCOEXPtakeda_targets_of_nup98_hoxa9_fusion_8d_dn
img Genes down-regulated in CD38+ [Gene ID=952] CLL (chronic lymphocytic leukemia) cells.coexpressionCOEXPpepper_chronic_lymphocytic_leukemia_dn
img Genes down-regulated in CD4+ [Gene ID=920] T lymphocytes after stimulation with prostaglandin E2 [PubChem=5280360].coexpressionCOEXPchemnitz_response_to_prostaglandin_e2_dn
img Genes down-regulated in CL1-5 cells (lung cancer) overexpressing DNAJB4 [Gene ID=11080] off a plasmid vector.coexpressionCOEXPtsai_dnajb4_targets_dn
img Genes down-regulated in CT60/4 cells (breast cancer reverted to normal by transfer of chromosome 8p region) vs parental MDA-MB-231 cells (deleted chromosome 8p).coexpressionCOEXPseitz_neoplastic_transformation_by_8p_deletion_dn
img Genes down-regulated in Caco-2 cells (intestinal epithelium) after coculture with the probiotic bacteria L. casei for 24h.coexpressionCOEXPtien_intestine_probiotics_24hr_dn
img Genes down-regulated in Caco-2 cells (intestinal epithelium) after coculture with the probiotic bacteria L. casei for 2h.coexpressionCOEXPtien_intestine_probiotics_2hr_dn
img Genes down-regulated in Caco-2 cells (intestinal epithelium) after coculture with the probiotic bacteria L. casei for 6h.coexpressionCOEXPtien_intestine_probiotics_6hr_dn
img Genes down-regulated in Cockayne syndrome fibroblasts rescued by expression of ERCC6 [Gene ID=2074] off a plasmid vector.coexpressionCOEXPnewman_ercc6_targets_dn
img Genes down-regulated in D-341 MED (OBR) cells (medulloblastoma) resistant to both carmustine and O6-BG [PubChem=2578, 4578].coexpressionCOEXPbacolod_resistance_to_alkylating_agents_dn
img Genes down-regulated in DLBCL (diffuse large B-cell lymphoma) cell lines sensitive to stimulation of CD40 [Gene ID=958] relative to the resistant ones.coexpressionCOEXPhollman_apoptosis_via_cd40_dn
img Genes down-regulated in DLD-1 cells (colon cancer) in response to hypoxia; might not be direct targets of HIF1A [Gene ID=3091].coexpressionCOEXPmizukami_hypoxia_dn
img Genes down-regulated in DU-145 cells (prostate cancer) in the absence and presence of a dominant negative form of AKT1 [Gene ID=207] upon exposure to HGF [Gene ID=3082] for 48 hr.coexpressionCOEXPxu_hgf_signaling_not_via_akt1_48hr_dn
img Genes down-regulated in DU-145 cells (prostate cancer) in the absence but not in the presence of a dominant negative form of AKT1 [Gene ID=207] upon exposure to HGF [Gene ID=3082] for 48 hr.coexpressionCOEXPxu_hgf_targets_induced_by_akt1_48hr_dn
img Genes down-regulated in DU-145 cells (prostate cancer) in the presence but not in the absence of a dominant negative form of AKT1 [Gene ID=207] upon exposure to HGF [Gene ID=3082] for 48 hr.coexpressionCOEXPxu_hgf_targets_repressed_by_akt1_dn
img Genes down-regulated in Daudi cells (B lymphocytes) stably expressing CD5 [Gene ID=921] off a plasmid vector.coexpressionCOEXPgary_cd5_targets_dn
img Genes down-regulated in ER(-) / PR(-) breast tumors (do not express ESR1 and PGR [Gene ID=2099, 5241]) with molecular similarity to ER(+) (class A) relative to the rest of the ER(-) / PR(-) samples (class B).coexpressionCOEXPdoane_breast_cancer_classes_dn
img Genes down-regulated in EVSA-T cells (breast cancer) after treatment with 3 micromolar THC (delta-9-tetrahydrocannabinol) [PubChem=6610319] for 24 h.coexpressionCOEXPcaffarel_response_to_thc_24hr_3_dn
img Genes down-regulated in EVSA-T cells (breast cancer) treated THC (delta-9-tetrahydrocannabinol) [PubChem=6610319].coexpressionCOEXPcaffarel_response_to_thc_dn
img Genes down-regulated in EVSA-T cells (breast cancer) treated with 3 micromolar THC (delta-9-tetrahydrocannabinol) [PubChem=6610319] for 8 h.coexpressionCOEXPcaffarel_response_to_thc_8hr_3_dn
img Genes down-regulated in EVSA-T cells (breast cancer) treated with 5 micromolar THC (delta-9-tetrahydrocannabinol) [PubChem=6610319] for 24 h.coexpressionCOEXPcaffarel_response_to_thc_24hr_5_dn
img Genes down-regulated in EVSA-T cells (breast cancer) treated with 5 micromolar THC (delta-9-tetrahydrocannabinol) [PubChem=6610319] for 8 h.coexpressionCOEXPcaffarel_response_to_thc_8hr_5_dn
img Genes down-regulated in FSHD (facioscapulohumeral muscular dystrophy) mesoangioblasts.coexpressionCOEXPmorosetti_facioscapulohumeral_muscular_distrophy_dn
img Genes down-regulated in H1299 cells (lung cancer) upon knockdown of SMAD6 [Gene ID=4091] by RNAi.coexpressionCOEXPjeon_smad6_targets_dn
img Genes down-regulated in H1299 cells (non-small cell lung cancer, NSCLC) expressing the Y144F mutant form of FHIT [Gene ID=2272].coexpressionCOEXPsemba_fhit_targets_dn
img Genes down-regulated in H1703 cells (non-small cell lung cancer, NSCLC) after knockdown of PRKCI [Gene ID=5584] by RNAi.coexpressionCOEXPfrederick_prkci_targets
img Genes down-regulated in H1975 cells (non-small cell lung cancer, NSCLC) resistant to gefitinib [PubChem=123631] after treatment with EGFR inhibitor CL-387785 [PubChem=2776] for 24h.coexpressionCOEXPkobayashi_egfr_signaling_24hr_dn
img Genes down-regulated in H1975 cells (non-small cell lung cancer, NSCLC) resistant to gefitinib [PubChem=123631] after treatment with EGFR inhibitor CL-387785 [PubChem=2776] for 6h.coexpressionCOEXPkobayashi_egfr_signaling_6hr_dn
img Genes down-regulated in H358 cells (lung cancer) by inducible expression of CEBPA [Gene ID=1050] off plasmid vector.coexpressionCOEXPhalmos_cebpa_targets_dn
img Genes down-regulated in H358 cells (lung cancer) by inducible expression of FOXA2 [GeneID=3170] in a Tet-off system.coexpressionCOEXPhuang_foxa2_targets_dn
img Genes down-regulated in H720 cells (lung cancer) after treatment with L663536 (MK886) [PubChem=105049], an inhibitor of leukotriene biosynthesis.coexpressionCOEXPmayburd_response_to_l663536_dn
img Genes down-regulated in HB2 cells (mammary epithelium) upon expression of KDM5B [Gene ID=10765] off an adenoviral vector.coexpressionCOEXPscibetta_kdm5b_targets_dn
img Genes down-regulated in HC11 cells (mammary epithelium) by expression of constantly active CTNNB1 [Gene ID=1499].coexpressionCOEXPkenny_ctnnb1_targets_dn
img Genes down-regulated in HCT116 cells (colon cancer) after treatment with amifostine [PubChem=2141] depending on the presence of TP53 [Gene ID=7157]: TP53-positive vs TP53-null cells.coexpressionCOEXPmann_response_to_amifostine_dn
img Genes down-regulated in HCT116 cells (colon cancer) by expression of MIR192 or MIR215 [Gene ID=406967, 406997] at 24 h.coexpressionCOEXPgeorges_targets_of_mir192_and_mir215
img Genes down-regulated in HCT116 cells (colon cancer) upon expression of MIR34B or MIR34C [Gene ID=407041, 407042] microRNAs.coexpressionCOEXPtoyota_targets_of_mir34b_and_mir34c
img Genes down-regulated in HCT8/S1 cells (colon cancer) which normally lack DCC [Gene ID=9423] compared to those stably expressing wild type DCC off a plasmid vector.coexpressionCOEXProdrigues_dcc_targets_dn
img Genes down-regulated in HCT8/S11 cells (colon cancer) engineered to stably express NTN1 [Gene ID=1630] off a plasmid vector.coexpressionCOEXProdrigues_ntn1_targets_dn
img Genes down-regulated in HCT8/S11 cells (colon cancer) which lack DCC [Gene ID=9423] and stably express NTN1 [Gene ID=1630].coexpressionCOEXProdrigues_ntn1_and_dcc_targets
img Genes down-regulated in HEK293 cells (embryo kidney) after knockdown of TUT1 [Gene ID=64852] by RNAi.coexpressionCOEXPmellman_tut1_targets_dn
img Genes down-regulated in HEK293 cells (embryonic kidney) at 6 h, 12 h or 24 h after infection with reovirus strain T3A (known as a strong inducer of apoptosis).coexpressionCOEXPdebiasi_apoptosis_by_reovirus_infection_dn
img Genes down-regulated in HEP3B cells (liver cancer) overexpressing ATF5 [Gene ID=22809] off a plasmid vector.coexpressionCOEXPgho_atf5_targets_dn
img Genes down-regulated in HET1A cells (esophagus epithelium) engineered to stably express CDX2 [Gene ID=1045].coexpressionCOEXPliu_cdx2_targets_dn
img Genes down-regulated in HFK cells (primary keratinocytes) in response to UVB irradiation.coexpressionCOEXPsimbulan_uv_response_normal_dn
img Genes down-regulated in HL-60 cells (acute myeloid leukemia, AML) by expression of p210 BCR-ABL [Gene ID=613, 25] fusion protein.coexpressionCOEXPray_targets_of_p210_bcr_abl_fusion_dn
img Genes down-regulated in HL-60 cells (acute promyelocytic leukemia, APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 24 h.coexpressionCOEXPkrige_response_to_tosedostat_24hr_dn
img Genes down-regulated in HL-60 cells (acute promyelocytic leukemia, APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 6 h.coexpressionCOEXPkrige_response_to_tosedostat_6hr_dn
img Genes down-regulated in HL-60 cells (promyeloid leukemia) by cantharidin [PubChem=6708701].coexpressionCOEXPzhang_response_to_cantharidin_dn
img Genes down-regulated in HMLE cells (immortalized nontransformed mammary epithelial) cells after loss of function of E-cadhedrin (CDH1) [Gene ID=999], which was achieved either by RNAi knockdown or by expression of a dominan-negative form of CDH1.coexpressionCOEXPonder_cdh1_targets_3_dn
img Genes down-regulated in HMLE cells (immortalized nontransformed mammary epithelium) after E-cadhedrin (CDH1) [Gene ID=999] knockdown by RNAi.coexpressionCOEXPonder_cdh1_targets_2_dn
img Genes down-regulated in HMLE cells (mmortalized nontransformed mammary epithelial) by expression of a dominant-negative form of E-cadhedrin (CDH1) [Gene ID=999].coexpressionCOEXPonder_cdh1_targets_1_dn
img Genes down-regulated in HPL1D cells (lung epithelium) upon exposure to nickel acetate [PubChem=9756].coexpressionCOEXPcheng_response_to_nickel_acetate
img Genes down-regulated in HSA/c and KYSE140 cells (esophageal squamous cell carcinoma, ESCC) after knockdown of PTTG1 [Gene ID=9232] by RNAi.coexpressionCOEXPito_pttg1_targets_dn
img Genes down-regulated in HT1080 (fibrosarcoma) cells by treatment with interferon beta for 6 h.coexpressionCOEXPder_ifn_beta_response_dn
img Genes down-regulated in HT1080 (fibrosarcoma) cells by treatment with interferon gamma for 6 h.coexpressionCOEXPder_ifn_gamma_response_dn
img Genes down-regulated in HT1080 cells (fibrosarcoma) by treatment with interferon alpha for 6 h.coexpressionCOEXPder_ifn_alpha_response_dn
img Genes down-regulated in HT1080 cells (fibrosarcoma) over-expressing MMP14 [Gene ID=4323] compared to those with knockdown of the gene by RNAi.coexpressionCOEXProzanov_mmp14_targets_dn
img Genes down-regulated in HT29 cells (colon cancer) after knockdown of CD24 [Gene ID=100133941] by both RNAi and monoclonal antibodies.coexpressionCOEXPsagiv_cd24_targets_dn
img Genes down-regulated in HUVEC cells (umbilical vein endothelium) by fenretinide [PubChem=1744].coexpressionCOEXPferrari_response_to_fenretinide_dn
img Genes down-regulated in HeLa cells (cervical carcinoma) 12 h after infection with adenovirus Ad12.coexpressionCOEXPdorn_adenovirus_infection_12hr_dn
img Genes down-regulated in HeLa cells (cervical carcinoma) 24 h after infection with adenovirus Ad12.coexpressionCOEXPdorn_adenovirus_infection_24hr_dn
img Genes down-regulated in HeLa cells (cervical carcinoma) 32 h after infection with adenovirus Ad12.coexpressionCOEXPdorn_adenovirus_infection_32hr_dn
img Genes down-regulated in HeLa cells (cervical carcinoma) 48 h after infection with adenovirus Ad12.coexpressionCOEXPdorn_adenovirus_infection_48hr_dn
img Genes down-regulated in HeLa cells (cervical carcinoma) by trabectedin [PubChem=3199].coexpressionCOEXPgajate_response_to_trabectedin_dn
img Genes down-regulated in HeLa cells after knockdown of MED1 [Gene ID=5469] by RNAi.coexpressionCOEXPudayakumar_med1_targets_dn
img Genes down-regulated in HepaRG cells (liver cancer) expressing constituvely active form of MTOR [Gene ID=2475].coexpressionCOEXPparent_mtor_signaling_dn
img Genes down-regulated in Jurkat cells (T lymphocyte) by expression of a constitutively active form of IRF3 [Gene ID=3661].coexpressionCOEXPgrandvaux_irf3_targets_dn
img Genes down-regulated in Jurkat cells (transformed T lymphocytes) after knockdown of BCL11B [Gene ID=64919] by RNAi.coexpressionCOEXPgrabarczyk_bcl11b_targets_dn
img Genes down-regulated in K562 (chronic myelogenous leukemia, CML) cells engineered to stably express RIZ1 [Gene ID=7799].coexpressionCOEXPpastural_riz1_targets_dn
img Genes down-regulated in K562 cells (bone marrow) after treatment with dasatinib [PubChem=3062316] or imatinib [PubChem=5291].coexpressionCOEXPnunoda_response_to_dasatinib_imatinib_dn
img Genes down-regulated in KCL22 cells (chronic myelogenous leukemia, CML, with BCR-ABL1 [GeneID=613, 25] fusion) by expression of CEBPA [GeneID=1050].coexpressionCOEXPtavor_cebpa_targets_dn
img Genes down-regulated in Kasumi-1 cells (acute myeloid leukaemia (AML) with the t(8;21) translocation) after knockdown of the AML1 MTG8 fusion [Gene ID=861, 862] by RNAi.coexpressionCOEXPdunne_targets_of_aml1_mtg8_fusion_dn
img Genes down-regulated in Kelly cells (neuroblastoma) by overexpressing INHBA [Gene ID=3624] off a plasmid vector.coexpressionCOEXPschramm_inhba_targets_dn
img Genes down-regulated in LD419 cells (fibroblast) after treatment with decitabine (5-aza-2'-deoxycytidine) [PubChem=451668].coexpressionCOEXPliang_silenced_by_methylation_dn
img Genes down-regulated in LNCaP cells (prostate cancer) after knockdown of SAM68 [Gene ID=10657] by RNAi.coexpressionCOEXPbusa_sam68_targets_dn
img Genes down-regulated in LNCaP cells (prostate cancer) by overexpression of SOX4 [Gene ID=6659] and up-regulated by its RNAi knockdown.coexpressionCOEXPliu_sox4_targets_dn
img Genes down-regulated in LNCaP cells (prostate cancer) in response to synthetic androgen R1881 [PubChem=13766].coexpressionCOEXPnelson_response_to_androgen_dn
img Genes down-regulated in LNCaP cells (prostate cancer) treated with forskolin [PubChem=47936], an activator of PKA pathway.coexpressionCOEXPwang_response_to_forskolin_dn
img Genes down-regulated in MCF-7 cells (breast cancer) after knockdown of YBX1 [Gene ID=4904] by RNAi.coexpressionCOEXPfujii_ybx1_targets_dn
img Genes down-regulated in MCF-7 cells (breast cancer) by estradiol (E2) [PubChem=5757].coexpressionCOEXPfrasor_response_to_estradiol_dn
img Genes down-regulated in MCF-7 cells (breast cancer) by overexpression of CMYB [Gene ID=4602] off adenovirus vector.coexpressionCOEXPliu_cmyb_targets_dn
img Genes down-regulated in MCF-7 cells (breast cancer) by selective estrogen receptor modulators (SERM) 4-hydroxytamoxifen, raloxifene, or ICI 182780 but not by estradiol [PubChem=44959, 5035, 3478439, 5757].coexpressionCOEXPfrasor_response_to_serm_or_fulvestrant_dn
img Genes down-regulated in MCF10A cells (breast cancer) by expression of LSM1 [Gene ID=27257] off a letiviral vector.coexpressionCOEXPstreicher_lsm1_targets_dn
img Genes down-regulated in MCF10A cells (breast cancer) grown at low (mesenchymal phenotype) compared to those grown at high (epithelial, basal-like phenotype) confluency.coexpressionCOEXPsarrio_epithelial_mesenchymal_transition_dn
img Genes down-regulated in MCF7 cells (breast cancer) after knockdown of HIF1A [Gene ID=3091] by RNAi.coexpressionCOEXPelvidge_hif1a_targets_dn
img Genes down-regulated in MCF7 cells (breast cancer) after knockdown of both HIF1A and HIF2A [Gene ID=3091, 2034] by RNAi.coexpressionCOEXPelvidge_hif1a_and_hif2a_targets_dn
img Genes down-regulated in MCF7 cells (breast cancer) after stimulation with NRG1 [Gene ID=3084].coexpressionCOEXPnagashima_nrg1_signaling_dn
img Genes down-regulated in MCF7 cells (breast cancer) after treatment with the oxydants: hydrogen peroxyde, menadione, and t-butyl hydroperoxyde [PubChem=784, 4055, 6410].coexpressionCOEXPchuang_oxidative_stress_response_dn
img Genes down-regulated in MCF7 cells (breast cancer) engineered to conditionally express LMO4 [Gene ID=8543] by a Tet Off system.coexpressionCOEXPwang_lmo4_targets_dn
img Genes down-regulated in MCF7 cells (breast cancer) engineered to conditionally express a dominant negative form of CLIM2 [Gene ID=8861] by a Tet Off system.coexpressionCOEXPwang_clim2_targets_dn
img Genes down-regulated in MCF7 cells (breast cancer) treated with hypoxia mimetic DMOG [PubChem=3080614].coexpressionCOEXPelvidge_hypoxia_by_dmog_dn
img Genes down-regulated in MCF7 cells (breast cancer) under hypoxia conditions.coexpressionCOEXPelvidge_hypoxia_dn
img Genes down-regulated in MDA-MB-231 cells (breast cancer) after knockdown of FXYD5 [Gene ID=53827] by RNAi.coexpressionCOEXPnam_fxyd5_targets_dn
img Genes down-regulated in MDA-MB-231 cells (breast cancer) after knockdown of PRKCA and ETS1 [Gene ID=5578, 2113] by RNAi.coexpressionCOEXPvetter_targets_of_prkca_and_ets1_dn
img Genes down-regulated in MDA-MB-231 cells (breast cancer) after knockdown of PTHLH [Gene ID=5744] by RNAi.coexpressionCOEXPdittmer_pthlh_targets_dn
img Genes down-regulated in MDA-MB-231 cells (breast cancer) after knockdown of SATB1 [Gene ID=6304] by RNAi.coexpressionCOEXPhan_satb1_targets_dn
img Genes down-regulated in MDA-MB-453 cells (class A ER(-) [Gene ID=2099] breast cancer) after exposure to the androgen R1881 [PubChem=13766].coexpressionCOEXPdoane_response_to_androgen_dn
img Genes down-regulated in MEWO cells (melanoma) after 48h of methionine [PubChem=876] deprivation.coexpressionCOEXPkokkinakis_methionine_deprivation_48hr_dn
img Genes down-regulated in MEWO cells (melanoma) after 96 h of methionine [PubChem=876] deprivation.coexpressionCOEXPkokkinakis_methionine_deprivation_96hr_dn
img Genes down-regulated in MFCF-7 cells (breast cancer) by exogenous HG1 [Gene ID=2688].coexpressionCOEXPxu_gh1_exogenous_targets_dn
img Genes down-regulated in MFCF-7 cells (breast cancer) upon stable autocrine expression of HG1 [Gene ID=2688].coexpressionCOEXPxu_gh1_autocrine_targets_dn
img Genes down-regulated in MS427 cells (Wilms tumor with normal WT1 [Gene ID=7490]) after treatment with 10 microM tretinoin (ATRA) [PubChem=5538] for 24 h.coexpressionCOEXPzirn_tretinoin_response_dn
img Genes down-regulated in MZ128 cells (Wilms tumor with mutated WT1 [Gene ID=7490]) after treatment with 10 microM tretinoin (ATRA) [PubChem=5538] for 24 h.coexpressionCOEXPzirn_tretinoin_response_wt1_dn
img Genes down-regulated in NB4 cells (acute promyelocytic leukemia, APL) by tretinoin [PubChem ID=5538] alone.coexpressionCOEXPxu_response_to_tretinoin_dn
img Genes down-regulated in NCI-H1299 cells (large cell neuroendocrine carcinoma) stably expressing SEMA3B [Gene ID=7869].coexpressionCOEXPkoyama_sema3b_targets_dn
img Genes down-regulated in NCI-H2170 cells (lung cancer) upon induction of resistance to cisplatin [PubChem ID=2767].coexpressionCOEXPwhiteside_cisplatin_resistance_dn
img Genes down-regulated in NHEK cells (normal epidermal keratinocytes) after UVB irradiation.coexpressionCOEXPenk_uv_response_keratinocyte_dn
img Genes down-regulated in NHEK cells (normal keratinocytes) by UV-B irradiation.coexpressionCOEXPdazard_response_to_uv_nhek_dn
img Genes down-regulated in NSCLC (non-small cell lung carcinoma) cell lines resistant to gefitinib [PubChem=123631] compared to the sensitive ones.coexpressionCOEXPcoldren_gefitinib_resistance_dn
img Genes down-regulated in OV-90 cells (ovarian cancer) exposed to ascites which inhibited invasion.coexpressionCOEXPpuiffe_invasion_inhibited_by_ascites_dn
img Genes down-regulated in P493-6 cells (B lymphocyte) by MYC [Gene ID=4609] and up-regulated by RNAi knockdown of TFRC [Gene ID=7037].coexpressionCOEXPodonnell_targets_of_myc_and_tfrc_dn
img Genes down-regulated in P493-6 cells (Burkitt's lymphoma) induced to express MYC [Gene ID=4609].coexpressionCOEXPschuhmacher_myc_targets_dn
img Genes down-regulated in PANC-1-S4KD cells (pancreatic cancer; SMAD4 [Gene ID=4089] knocked down by RNAi) after stimulation by TGF1B [Gene ID=7040] for 2 h.coexpressionCOEXPjazag_tgfb1_signaling_via_smad4_dn
img Genes down-regulated in PANC-1-puro cells (pancreatic cancer) stimulated by TGF1B [Gene ID=7040] for 2 h.coexpressionCOEXPjazag_tgfb1_signaling_dn
img Genes down-regulated in PC-3 cells (prostate cancer) stably expressing ST7 [Gene ID=7982] off a plasmid vector.coexpressionCOEXPhooi_st7_targets_dn
img Genes down-regulated in PC3 cells (prostate cancer) after knockdown of EZH2 [Gene ID=2146] by RNAi.coexpressionCOEXPnuytten_ezh2_targets_dn
img Genes down-regulated in PC3 cells (prostate cancer) after knockdown of NIPP1 [Gene ID=5511] by RNAi.coexpressionCOEXPnuytten_nipp1_targets_dn
img Genes down-regulated in PCI-35 cells (pancreatic cancer, lack endogenous DUSP6 [Gene ID=1848]) upon expression of DUSP6 off an adenoviral vector.coexpressionCOEXPfurukawa_dusp6_targets_pci35_dn
img Genes down-regulated in PaCa44 and CFPAC1 cells (pancreatic cancer) after treatment with decitabine [PubChem=451668], a DNA hypomethylating agent similar to azacitidine [PubChem=9444].coexpressionCOEXPmissiaglia_regulated_by_methylation_dn
img Genes down-regulated in RCC4 cells (renal cell carcinoma) engineered to stably express VHL [Gene ID=7428] off a plasmid vector.coexpressionCOEXPmaina_vhl_targets_dn
img Genes down-regulated in RD cells (embryonal rhabdomyosarcoma, ERMS) by expression of PAX3- or PAX7-FOXO1 [Gene ID=5077, 5081, 2308] fusions off retroviral vectors.coexpressionCOEXPdavicioni_targets_of_pax_foxo1_fusions_dn
img Genes down-regulated in RMS cells (rhabdomyosarcoma) expressing PAX3 or PAX7 fusions with FOXO1 [Gene ID=5077, 5081, 2308] compared to the fusion negative cell lines.coexpressionCOEXPdavicioni_rhabdomyosarcoma_pax_foxo1_fusion_dn
img Genes down-regulated in Rh4 cells (alveolar rhabdomyosarcoma, ARMS) after knockdown of the PAX3-FOXO1 [Gene iD=5077, 2308] fusion protein by RNAi for 72 hr.coexpressionCOEXPebauer_targets_of_pax3_foxo1_fusion_dn
img Genes down-regulated in SCC12B2 cells (squamous cell carcinoma) by UV-B irradiation.coexpressionCOEXPdazard_response_to_uv_scc_dn
img Genes down-regulated in SCLC (small cell lung cancer) cells with acquired resistance to ABT-737 [PubChem=11228183], an inhibitor of the BCL2 [Gene ID=596] family proteins.coexpressionCOEXPhann_resistance_to_bcl2_inhibitor_dn
img Genes down-regulated in SH-SY5Y cells (neuroblastoma) after treatment with epoxomicin [PubChem=3035402], a protease inhibitor causing apoptosis.coexpressionCOEXPconcannon_apoptosis_by_epoxomicin_dn
img Genes down-regulated in SK-N-DZ cells (neuroblastoma) after knockdown of MIF [Gene ID=4282] by antisense RNA.coexpressionCOEXPren_mif_targets_dn
img Genes down-regulated in SK-NEP-1 cells (Wilm's tumor ) stably expressing inactivated forms of STAT1 [Gene ID=6772] under growth stress (hypoxia or nutritional deprivation).coexpressionCOEXPtimofeeva_growth_stress_via_stat1_dn
img Genes down-regulated in SKOC-3 cells (ovarian cancer) after YB-1 (YBX1) [Gene ID=4904] knockdown by RNAi.coexpressionCOEXPbasaki_ybx1_targets_dn
img Genes down-regulated in ST1 cells (adult T-cell leukemia, ATL) after knockdown of FRA2 [Gene ID=2355] by RNAi.coexpressionCOEXPnakayama_fra2_targets
img Genes down-regulated in SW480 cells (colon cancer with mutated p53 [Gene ID=7157]) upon expression of BRCA1 [Gene ID=672] off an adenovirus vector.coexpressionCOEXPmaclachlan_brca1_targets_dn
img Genes down-regulated in SaOS-2 cells (osteosarcoma) upon expression of PAX3-FOXO1 [Gene ID=5077, 2308] fusion protein off an adenoviral vector.coexpressionCOEXPbegum_targets_of_pax3_foxo1_fusion_dn
img Genes down-regulated in SaOS-2 cells (osteosarcoma) upon knockdown of YY1 [Gene ID=7528] by RNAi.coexpressionCOEXPde_yy1_targets_dn
img Genes down-regulated in SiHa cells (cervical carcinoma) by stable expression of NOL7 [Gene ID=51406] off a plasmid vector.coexpressionCOEXPhasina_nol7_targets_dn
img Genes down-regulated in T cell acute lymphocytic leukemia (T-ALL) patients refractory to chemotherapy treatment.coexpressionCOEXPchiaretti_t_all_refractory_to_therapy
img Genes down-regulated in T helper cells (defines as CD4+) isolated from patients with mucosis fungoides compared to those from normal control donors.coexpressionCOEXPhahtola_mycosis_fungoides_cd4_dn
img Genes down-regulated in T lymphocytes overexpressing TERT [Gene ID=7015] off a retrovirus vector.coexpressionCOEXProeth_tert_targets_dn
img Genes down-regulated in T-PLL cells (T-cell prolymphocytic leukemia) bearing the inv(14)/t(14:14) chromosomal aberration.coexpressionCOEXPdeurig_t_cell_prolymphocytic_leukemia_dn
img Genes down-regulated in T1 cells (primary melanoma, sensitive to TRAIL [Gene ID=8743]) compared to G1 cells (metastatic melanoma, resistant to TRAIL).coexpressionCOEXPhamai_apoptosis_via_trail_dn
img Genes down-regulated in T24 (bladder cancer) cells in response to the photodynamic therapy (PDT) stress.coexpressionCOEXPbuytaert_photodynamic_therapy_stress_dn
img Genes down-regulated in T47D cells (breast cancer) after COBRA1 [Gene ID=25920] knockdown by RNAi.coexpressionCOEXPaiyar_cobra1_targets_dn
img Genes down-regulated in T98 cells (glioma) 48 h after treatment with interferon beta.coexpressionCOEXPnatsume_response_to_interferon_beta_dn
img Genes down-regulated in T98G cells (glioblastoma) by TNC [Gene ID=3371].coexpressionCOEXPruiz_tnc_targets_dn
img Genes down-regulated in T98G cells (glioma, express MGMT [Gene ID=4255]) by carmustine [PubChem=2578] at 24 h.coexpressionCOEXPbandres_response_to_carmustin_mgmt_24hr_dn
img Genes down-regulated in T98G cells (glioma, express MGMT [Gene ID=4255]) by carmustine [PubChem=2578] at 48 h.coexpressionCOEXPbandres_response_to_carmustin_mgmt_48hr_dn
img Genes down-regulated in TC71 and EWS502 cells (Ewing's sarcoma) upon knockdown of the EWSR1-FLII fusion [Gene ID=2130, 2314].coexpressionCOEXPkinsey_targets_of_ewsr1_flii_fusion_dn
img Genes down-regulated in TMX2-28 cells (breast cancer) which do not express ESR1 [Gene ID=2099]) compared to the parental MCF7 cells which do.coexpressionCOEXPgozgit_esr1_targets_dn
img Genes down-regulated in Tet-On HEK293 cells (embryonic kidney) by expression of HNF4A [Gene ID=3172].coexpressionCOEXPlucas_hnf4a_targets_dn
img Genes down-regulated in U2-OS Tet-On cells (osteosarcoma) after induction of ESX1 [Gene ID=80712] expression.coexpressionCOEXPyanagihara_esx1_targets
img Genes down-regulated in U2OS cells (osteosarcoma) upon knockdown of HDAC1 [Gene ID=3065] by RNAi.coexpressionCOEXPsenese_hdac1_targets_dn
img Genes down-regulated in U2OS cells (osteosarcoma) upon knockdown of HDAC2 [Gene ID=3066] by RNAi.coexpressionCOEXPsenese_hdac2_targets_dn
img Genes down-regulated in U2OS cells (osteosarcoma) upon knockdown of HDAC3 [Gene ID=8841] by RNAi.coexpressionCOEXPsenese_hdac3_targets_dn
img Genes down-regulated in U2OS cells (osteosarcoma) upon knockdown of both HDAC1 and HDAC2 [Gene ID=3065, 3066] by RNAi.coexpressionCOEXPsenese_hdac1_and_hdac2_targets_dn
img Genes down-regulated in U937 cells (acute promyelocytic leukemia, APL) expressing RARA [Gene ID=5914] fused with either PML or PLZF [Gene ID=5371, 7704].coexpressionCOEXPpark_apl_pathogenesis_dn
img Genes down-regulated in UB27 cells (osteosarcoma) at 12 hr after inducing the expression of a mutated form of WT1 [Gene ID=7490].coexpressionCOEXPkim_wt1_targets_12hr_dn
img Genes down-regulated in UB27 cells (osteosarcoma) at 8 hr after inducing the expression of a mutant form of WT1 [Gene ID=7490].coexpressionCOEXPkim_wt1_targets_8hr_dn
img Genes down-regulated in UB27 cells (osteosarcoma) at any time point after inducing the expression of a mutant form of WT1 [Gene ID=7490].coexpressionCOEXPkim_wt1_targets_dn
img Genes down-regulated in WE17/10 cells (CD4+ [Gene ID=920] T lymphocytes) infected by HTLV1 (and thus displaying low CD7 [Gene ID=924]) compared to the uninfected (i.e., CD7+) cells.coexpressionCOEXPakl_htlv1_infection_dn
img Genes down-regulated in WI-38 cells (senescent primary fibroblasts) after inactivation of TP53 [Gene ID=7157] by GSE56 polypeptide.coexpressionCOEXPtang_senescence_tp53_targets_dn
img Genes down-regulated in Wilm's tumor samples compared to fetal kidney.coexpressionCOEXPli_wilms_tumor_vs_fetal_kidney_1_dn
img Genes down-regulated in ZR-75-1 cells (breast cancer, amplified 8p11-12 region) upon knockdown of PPAPDC1B [Gene ID=84513] by RNAi.coexpressionCOEXPbernard_ppapdc1b_targets_dn
img Genes down-regulated in a breast cancer cell line resistant to tamoxifen [PubChem ID=5376] compared to the parental line sensitive to the drug.coexpressionCOEXPbecker_tamoxifen_resistance_dn
img Genes down-regulated in acute myeloid leukemia (AML) patients with mutated NPM1 [Gene ID=4869].coexpressionCOEXPverhaak_aml_with_npm1_mutated_dn
img Genes down-regulated in acute myeloid leukemia (AML) samples with constitutively activated FLT3 [Gene ID=2322] or with activating point mutations within NRAS [Gene ID=4893].coexpressionCOEXPneben_aml_with_flt3_or_nras_dn
img Genes down-regulated in acute promyelocytic leukemia (APL) patients with mutated FLT3 [Gene ID=2322].coexpressionCOEXPgale_apl_with_flt3_mutated_dn
img Genes down-regulated in adipose tissue mesenchymal stem cells (ASC) vs bone marrow mesenchymal stem cells (rBMSC)coexpressionCOEXPizadpanah_stem_cell_adipose_vs_bone_dn
img Genes down-regulated in adult T-cell leukemia (ATL), chronic vs acute clinical condition.coexpressionCOEXPchoi_atl_chronic_vs_acute_dn
img Genes down-regulated in anaplastic thyroid carcinoma (ATC) compared to normal thyroid tissue.coexpressionCOEXProdrigues_thyroid_carcinoma_anaplastic_dn
img Genes down-regulated in at least 8 of 11 sarcoma cell lines by trabectedin [PubChem=3199].coexpressionCOEXPmartinez_response_to_trabectedin_dn
img Genes down-regulated in at least one of three multiple myeloma (MM) cell lines by TSA [PubChem=5562].coexpressionCOEXPheller_hdac_targets_dn
img Genes down-regulated in at least one of three multiple myeloma (MM) cell lines treated with the DNA hypomethylating agent decitabine (5-aza-2'-deoxycytidine) [PubChem=451668].coexpressionCOEXPheller_silenced_by_methylation_dn
img Genes down-regulated in atria of failing hearts (DCM and ICM) compared to healthy controls.coexpressionCOEXPkaab_failed_heart_atrium_dn
img Genes down-regulated in atypical ductal hyperplastic tissues from patients with (ADHC) breast cancer vs those without the cancer (ADH).coexpressionCOEXPpoola_invasive_breast_cancer_dn
img Genes down-regulated in basal mammary epithelial cells compared to the luminal ones.coexpressionCOEXPhuper_breast_basal_vs_luminal_dn
img Genes down-regulated in basal subtype of breast cancer samles.coexpressionCOEXPsmid_breast_cancer_basal_dn
img Genes down-regulated in basal-like breast cancer cell lines as compared to the mesenchymal-like ones.coexpressionCOEXPcharafe_breast_cancer_basal_vs_mesenchymal_dn
img Genes down-regulated in biphasic (mixed) vs epithelial subtypes of malignant peritoneal mesothelioma.coexpressionCOEXPborczuk_malignant_mesothelioma_dn
img Genes down-regulated in bladder cancer cells resistant to cisplatin [PubChem=2767] compared to the parental cells sensitive to the drug.coexpressionCOEXPtsunoda_cisplatin_resistance_dn
img Genes down-regulated in blood samples from bladder cancer patients.coexpressionCOEXPosman_bladder_cancer_dn
img Genes down-regulated in blood vessel cells from wound site.coexpressionCOEXProy_wound_blood_vessel_dn
img Genes down-regulated in bone marrow hematopoietic stem cells (HSC, CD34+ [Gene ID=947]) from patients with high risk of myelodysplastic syndrom (MDS) compared to the low risk patients.coexpressionCOEXPhofmann_myelodysplastic_syndrom_risk_dn
img Genes down-regulated in bone marrow hematopoietic stem cells (HSC, CD34+ [Gene ID=947]) from patients with high risk of myelodysplastic syndrome (MDS) compared with healthy controls.coexpressionCOEXPhofmann_myelodysplastic_syndrom_high_risk_dn
img Genes down-regulated in bone marrow hematopoietic stem cells (HSC, CD34+ [Gene ID=947]) from patients with low risk of myelodysplastic syndrome (MDS) compared with healthy controls.coexpressionCOEXPhofmann_myelodysplastic_syndrom_low_risk_dn
img Genes down-regulated in bone relapse of breast cancer.coexpressionCOEXPsmid_breast_cancer_relapse_in_bone_dn
img Genes down-regulated in bones at 24 h after injection of GH1 [Gene ID=2688] to mice without detectable endogenous growth hormone.coexpressionCOEXPgovoni_gh1_targets_24hr_dn
img Genes down-regulated in brain endothelial cells from patients with Alzheimer disease.coexpressionCOEXPwu_alzheimer_disease_dn
img Genes down-regulated in brain from patients with Alzheimer's disease.coexpressionCOEXPblalock_alzheimers_disease_dn
img Genes down-regulated in brain relapse of breast cancer.coexpressionCOEXPsmid_breast_cancer_relapse_in_brain_dn
img Genes down-regulated in breast cancer tumors (formed by MCF-7 xenografts) resistant to tamoxifen [PubChem=5376].coexpressionCOEXPmassarweh_tamoxifen_resistance_dn
img Genes down-regulated in bulk samples from early primary breast tumors expressing ESR1 [Gene ID=2099] vs the ESR1 negative samples.coexpressionCOEXPyang_breast_cancer_esr1_bulk_dn
img Genes down-regulated in cancer endometrium samples compared to the normal endometrium.coexpressionCOEXPwong_endmetrium_cancer_dn
img Genes down-regulated in cancer stem cells derived from glyoblastoma tumors: CD133+ [Gene ID=8842] vs. CD133- cells.coexpressionCOEXPbeier_glioma_stem_cell_dn
img Genes down-regulated in chondrosarcoma and ovarian carcinoma cell lines which developed resistance to trabectedin [PubChem=3199].coexpressionCOEXPmarchini_trabectedin_resistance_dn
img Genes down-regulated in chronic lymphocytic leukemia (CLL) samples bearing deletions in the 13q14 region.coexpressionCOEXPouillette_cll_13q14_deletion_dn
img Genes down-regulated in circulating endothelial cells (CEC) from cancer patients compared to those from healthy donors.coexpressionCOEXPsmirnov_circulating_endotheliocytes_in_cancer_dn
img Genes down-regulated in colorectal adenoma compared to normal mucosa samples.coexpressionCOEXPsabates_colorectal_adenoma_dn
img Genes down-regulated in colorectal carcinoma samples positive for MSI (microsatellite instability) compared to the MSI negative ones.coexpressionCOEXPkoinuma_colon_cancer_msi_dn
img Genes down-regulated in common hematopoietic progenitor cells isolated from bone marrow of patients with Diamond-Blackfan anemia (DBA) and mutated RPS19 [Gene ID=6223].coexpressionCOEXPgazda_diamond_blackfan_anemia_progenitor_dn
img Genes down-regulated in constitutively invasive HT-29 5M21 cells (colon cancer) vs those expressing functionally inactive TATI [Gene ID=6690].coexpressionCOEXPgouyer_tati_targets_dn
img Genes down-regulated in corneal fibroblasts after treatment with IL1A [Gene ID=3552].coexpressionCOEXPmahajan_response_to_il1a_dn
img Genes down-regulated in cultured stromal stem cells from adipose tissue, compared to the freshly isolated cells.coexpressionCOEXPboquest_stem_cell_cultured_vs_fresh_dn
img Genes down-regulated in derivatives of MCF-7aro cells (breast cancer) that developed resistance to tamoxifen [PubChem=5376] or inhibitors of aromatase (CYP19A1) [Gene ID=1588].coexpressionCOEXPmasri_resistance_to_tamoxifen_and_aromatase_inhibitors_dn
img Genes down-regulated in dividing CD34+ [Gene ID=8842] cells isolated from peripheral blood of CML (chronic myeloid leukemia) patients compared to the dividing cells from normal donors.coexpressionCOEXPgraham_cml_dividing_vs_normal_dividing_dn
img Genes down-regulated in ductal carcinoma vs normal ductal breast cells.coexpressionCOEXPturashvili_breast_ductal_carcinoma_vs_ductal_normal_dn
img Genes down-regulated in ductal carcinoma vs normal lobular breast cells.coexpressionCOEXPturashvili_breast_ductal_carcinoma_vs_lobular_normal_dn
img Genes down-regulated in ductal vs lobular carcinoma breast tumor cells.coexpressionCOEXPturashvili_breast_carcinoma_ductal_vs_lobular_dn
img Genes down-regulated in early primary breast tumors expressing ESR1 [Gene ID=2099] vs the ESR1 negative ones.coexpressionCOEXPyang_breast_cancer_esr1_dn
img Genes down-regulated in endometroid endometrial tumors from patients with lymph node metastases compared to those without the metastases.coexpressionCOEXPbidus_metastasis_dn
img Genes down-regulated in endothelial cells derived from invasive ovarian cancer tissue.coexpressionCOEXPlu_tumor_vasculature_dn
img Genes down-regulated in epidermis after to UVB irradiation.coexpressionCOEXPenk_uv_response_epidermis_dn
img Genes down-regulated in epithelial ovarian cancer (EOC) biopsies: invasive (TOV) vs low malignant potential (LMP) tumors.coexpressionCOEXPouellet_ovarian_cancer_invasive_vs_lmp_dn
img Genes down-regulated in erythroid lineage cells by RUNX1-RUNX1T1 [Gene ID=861, 862] fusion .coexpressionCOEXPtonks_targets_of_runx1_runx1t1_fusion_erythrocyte_dn
img Genes down-regulated in erythroid progenitor cells isolated from bone marrow of patients with Diamond-Blackfan anemia (DBA) and mutated RPS19 [Gene ID=6223].coexpressionCOEXPgazda_diamond_blackfan_anemia_erythroid_dn
img Genes down-regulated in esophageal adenocarcinoma (EAC) and Barret's esophagus (BE) relative to normal esophagi.coexpressionCOEXPwang_barretts_esophagus_and_esophagus_cancer_dn
img Genes down-regulated in fibroblasts expressing different mutant forms of ERCC3 [Gene ID=2071]: XP/CS (xeroderma pigmentosum (XP) and Cockraine's syndrome (CS)) vs TTD (trichothiodystrophy).coexpressionCOEXPdacosta_ercc3_allele_xpcs_vs_ttd_dn
img Genes down-regulated in fibroblasts expressing mutant forms of ERCC3 [Gene ID=2071] after UV irradiation.coexpressionCOEXPdacosta_uv_response_via_ercc3_dn
img Genes down-regulated in fibroblasts expressing the XP/CS mutant form of ERCC3 [Gene ID=2071], after low dose UVC irradiation.coexpressionCOEXPdacosta_low_dose_uv_response_via_ercc3_xpcs_dn
img Genes down-regulated in fibroblasts from middle-age individuals, compared to those from the young donors.coexpressionCOEXPly_aging_middle_dn
img Genes down-regulated in fibroblasts from patients with Hutchinson-Gilford progeria (premature aging), compared to those from normal young individuals.coexpressionCOEXPly_aging_premature_dn
img Genes down-regulated in fibroblasts with defective XPC [Gene ID=7508] in response to cisplatin [PubChem=2767].coexpressionCOEXPwang_cisplatin_response_and_xpc_dn
img Genes down-regulated in five primary endothelial cell types (lung, aortic, iliac, dermal, and colon) by IFNG [Gene ID=3458].coexpressionCOEXPsana_response_to_ifng_dn
img Genes down-regulated in five primary endothelial cell types (lung, aortic, iliac, dermal, and colon) by TNF [Gene ID=7124].coexpressionCOEXPsana_tnf_signaling_dn
img Genes down-regulated in follicular thyroid adenoma (FTA) compared to other thyroid tumors.coexpressionCOEXPfontaine_follicular_thyroid_adenoma_dn
img Genes down-regulated in follicular thyroid carcinoma (FTC) samples that bear PAX8-PPARG [Gene ID=7849, 5468] fusion protein.coexpressionCOEXPlui_targets_of_pax8_pparg_fusion
img Genes down-regulated in freshly isolated CD31- [Gene ID=5175] (stromal stem cells from adipose tissue) versus the CD31+ (non-stem) counterparts.coexpressionCOEXPboquest_stem_cell_dn
img Genes down-regulated in gastric cancer cell lines resistant to 5-fluorouracil [PubChem=3385].coexpressionCOEXPkang_fluorouracil_resistance_dn
img Genes down-regulated in gastric cancer cell lines resistant to cisplatin [PubChem=2767].coexpressionCOEXPkang_cisplatin_resistance_dn
img Genes down-regulated in genomically unstable Ewing's sarcoma tumors compared to the stable ones.coexpressionCOEXPferreira_ewings_sarcoma_unstable_vs_stable_dn
img Genes down-regulated in glioblastoma cell lines displaying spherical growth (cluster-1) compared to those displaying semiadherent or adherent growth phenotype (cluster-2).coexpressionCOEXPguenther_growth_spherical_vs_adherent_dn
img Genes down-regulated in glioma cell lines after knockdown of SPARC [Gene ID=6678] by RNAi.coexpressionCOEXPshi_sparc_targets_dn
img Genes down-regulated in glioma cell lines treated with both decitabine [PubChem=451668] and TSA [PubChem=5562].coexpressionCOEXPkim_response_to_tsa_and_decitabine_dn
img Genes down-regulated in granulocytes by RUNX1-RUNX1T1 [Gene ID=861, 862] fusion.coexpressionCOEXPtonks_targets_of_runx1_runx1t1_fusion_granulocyte_dn
img Genes down-regulated in hES cells (human embryonic stem cells) after treatment with the ALK [Gene ID=238] inhibitor SB-431542 [PubChem=16079008].coexpressionCOEXPtesar_alk_targets_human_es_4d_dn
img Genes down-regulated in hES cells (human embryonic stem cells) after treatment with the ALK [Gene ID=238] inhibitor SB-431542 [PubChem=4521392].coexpressionCOEXPtesar_alk_targets_human_es_5d_dn
img Genes down-regulated in hairy cell leukemia (HCL) compared with normal and other neoplastic B cell populations.coexpressionCOEXPbasso_hairy_cell_leukemia_dn
img Genes down-regulated in head and neck tumor samples which clustered around known hypoxia genes.coexpressionCOEXPwinter_hypoxia_dn
img Genes down-regulated in hematopoietic progenitor cells (HPC) of T lymphocyte and NK (natural killer) lineage.coexpressionCOEXPhaddad_t_lymphocyte_and_nk_progenitor_dn
img Genes down-regulated in hematopoietic stem cells (HSC, CD34+ [Gene ID=947]) cultured in a three-dimentional collagen gel compared to the cells grown in suspension.coexpressionCOEXPoswald_hematopoietic_stem_cell_in_collagen_gel_dn
img Genes down-regulated in hepatoblastoma samples compared to normal liver tissue.coexpressionCOEXPcairo_hepatoblastoma_dn
img Genes down-regulated in hepatocellular carcinoma (HCC) cell lines resistant to IFNA2 [Gene ID=3440].coexpressionCOEXPwong_ifna2_resistance_dn
img Genes down-regulated in hepatocellular carcinoma (HCC) cells with hepatic stem cell properties.coexpressionCOEXPyamashita_liver_cancer_stem_cell_dn
img Genes down-regulated in hepatocellular carcinoma (HCC) compared to normal liver samples.coexpressionCOEXPacevedo_liver_cancer_dn
img Genes down-regulated in hepatocellular carcinoma (HCC) from MYC and E2F1 [Gene ID=4609, 1869] double transgenic mice.coexpressionCOEXPlee_liver_cancer_myc_e2f1_dn
img Genes down-regulated in hepatocellular carcinoma (HCC) induced by ciprofibrate [PubChem=2763].coexpressionCOEXPlee_liver_cancer_ciprofibrate_dn
img Genes down-regulated in hepatocellular carcinoma (HCC) induced by diethylnitrosamine (DENA) [PubChem=5921].coexpressionCOEXPlee_liver_cancer_dena_dn
img Genes down-regulated in hepatocellular carcinoma (HCC) induced by overexpression of E2F1 [Gene ID=1869].coexpressionCOEXPlee_liver_cancer_e2f1_dn
img Genes down-regulated in hepatocellular carcinoma (HCC) induced by overexpression of MYC [Gene ID=4609].coexpressionCOEXPlee_liver_cancer_myc_dn
img Genes down-regulated in hepatocellular carcinoma (HCC) samples from patients with early recurrence (within 2 years after surgery) after resection.coexpressionCOEXPyoshioka_liver_cancer_early_recurrence_dn
img Genes down-regulated in hepatocellular carcinoma (HCC) tissue of MYC and TGFA [Gene ID=4609, 7039] double transgenic mice.coexpressionCOEXPlee_liver_cancer_myc_tgfa_dn
img Genes down-regulated in hepatocellular carcinoma (HCC) with early recurrence.coexpressionCOEXPkurokawa_liver_cancer_early_recurrence_dn
img Genes down-regulated in hepatocellular carcinoma of ACOX1 [Gene ID=51] knockout mice.coexpressionCOEXPlee_liver_cancer_acox1_dn
img Genes down-regulated in huT78R cells (cutaneous T-cell lymphoma, CTCL) resistant to IFNA2 [Gene ID=3440] compared to the IFN2A sensitive parental cell line.coexpressionCOEXPtracey_resistance_to_ifna2_dn
img Genes down-regulated in hypertrophic scar fibroblasts in response to IL6 [Gene ID=3569].coexpressionCOEXPdasu_il6_signaling_scar_dn
img Genes down-regulated in immortalized cell lines.coexpressionCOEXPfridman_immortalization_dn
img Genes down-regulated in immunoglobulin light chain amyloidosis plasma cells (ALPC) compared to multiple myeloma (MM) cells.coexpressionCOEXPabraham_alpc_vs_multiple_myeloma_dn
img Genes down-regulated in invasive ductal carcinoma (IDC) relative to ductal carcinoma in situ (DCIS, non-invasive).coexpressionCOEXPschuetz_breast_cancer_ductal_invasive_dn
img Genes down-regulated in laser microdissected (LCM) samples of early primary breast tumors expressing ESR1 [Gene ID=2099] vs the ESR1 negative ones.coexpressionCOEXPyang_breast_cancer_esr1_laser_dn
img Genes down-regulated in late stage (stage 3) endometrial cancers compared to the earlier stages (stage 1 and 2).coexpressionCOEXPwong_endometrial_cancer_late
img Genes down-regulated in lesional skin biopsies from mycosis fundoides patients compared to the normal skin samples.coexpressionCOEXPhahtola_mycosis_fungoides_skin_dn
img Genes down-regulated in leukemic stem cells (LSC), defined as CD34+CD38- [Gene ID=947, 952] cells from AML (acute myeloid leukemia patients) compared to the CD34+CD38+ cells.coexpressionCOEXPgal_leukemic_stem_cell_dn
img Genes down-regulated in liver relapse of breast cancer.coexpressionCOEXPsmid_breast_cancer_relapse_in_liver_dn
img Genes down-regulated in liver tumor compared to the normal adjacent tissue.coexpressionCOEXPacevedo_liver_tumor_vs_normal_adjacent_tissue_dn
img Genes down-regulated in lobular carcinoma vs normal ductal breast cells.coexpressionCOEXPturashvili_breast_lobular_carcinoma_vs_ductal_normal_dn
img Genes down-regulated in lobular carcinoma vs normal lobular breast cells.coexpressionCOEXPturashvili_breast_lobular_carcinoma_vs_lobular_normal_dn
img Genes down-regulated in low grade (LMP and G1) serous ovarian carcinomas vs the higher grade invasive tumors (G2 and G3).coexpressionCOEXPmeinhold_ovarian_cancer_low_grade_dn
img Genes down-regulated in luminal-like breast cancer cell lines compared to the basal-like ones.coexpressionCOEXPcharafe_breast_cancer_luminal_vs_basal_dn
img Genes down-regulated in luminal-like breast cancer cell lines compared to the mesenchymal-like ones.coexpressionCOEXPcharafe_breast_cancer_luminal_vs_mesenchymal_dn
img Genes down-regulated in lung relapse of breast cancer.coexpressionCOEXPsmid_breast_cancer_relapse_in_lung_dn
img Genes down-regulated in lymph nodes from patients with mantle cell lymphoma (MCL) compared to the non-malignant hyperplastic lymph nodes.coexpressionCOEXPhofmann_cell_lymphoma_dn
img Genes down-regulated in lymphoblastoid cells from the European population compared to those from the Asian population.coexpressionCOEXPspielman_lymphoblast_european_vs_asian_dn
img Genes down-regulated in mARMS (molecular ARMS) compared to the mERMS (molecular ERMS) class of rhabdomyosarcoma tumors.coexpressionCOEXPdavicioni_molecular_arms_vs_erms_dn
img Genes down-regulated in macrophage by live P.gingivalis.coexpressionCOEXPzhou_inflammatory_response_live_dn
img Genes down-regulated in macrophages by P.gingivalis FimA pathogen.coexpressionCOEXPzhou_inflammatory_response_fima_dn
img Genes down-regulated in macrophages by P.gingivalis LPS (lipopolysaccharide).coexpressionCOEXPzhou_inflammatory_response_lps_dn
img Genes down-regulated in mature plasma cells compared with plasmablastic B lymphocytes.coexpressionCOEXPtarte_plasma_cell_vs_plasmablast_dn
img Genes down-regulated in medullary breast cancer (MBC) relative to ductal breast cancer (DBD).coexpressionCOEXPbertucci_medullary_vs_ductal_breast_cancer_dn
img Genes down-regulated in mesenchymal stem cells (MSC) engineered to express EWS-FLI1 [Gene ID=2130, 2321] fusion protein.coexpressionCOEXPriggi_ewing_sarcoma_progenitor_dn
img Genes down-regulated in metastases from malignant melanoma compared to the primary tumors.coexpressionCOEXPjaeger_metastasis_dn
img Genes down-regulated in metastatic breast cancer tumors having type 2 amplification in the 20q13 region; involves MYBL2, STK6 and ZNF217 [Gene ID=4605, 6790, 7764]coexpressionCOEXPginestier_breast_cancer_20q13_amplification_dn
img Genes down-regulated in metastatic tumors from the whole panel of patients with prostate cancer.coexpressionCOEXPchandran_metastasis_dn
img Genes down-regulated in metastatic vs non-metastatic HNSCC (head and neck squamous cell carcinoma) samples.coexpressionCOEXPrickman_metastasis_dn
img Genes down-regulated in metastatic vs non-metastatic stromal cells originated from either bone or prostate tissues.coexpressionCOEXPsung_metastasis_stroma_dn
img Genes down-regulated in monocyte-derived dendritic cells (MDDC) after stimulation with galecin-1 (lectin, LGALS1) [Gene ID=3956] compared to that with bacterial lipopolysaccharide (LPS).coexpressionCOEXPfulcher_inflammatory_response_lectin_vs_lps_dn
img Genes down-regulated in monocytes by RUNX1-RUNX1T1 [Gene ID=861, 862] fusion.coexpressionCOEXPtonks_targets_of_runx1_runx1t1_fusion_monocyte_dn
img Genes down-regulated in monocytes isolated from peripheral blood samples of Sezary syndrom patients compared to those from healthy normal donors.coexpressionCOEXPhahtola_sezary_syndrom_dn
img Genes down-regulated in monocytes isolated from peripheral blood samples of patients with mucosis fungoides compared to those from normal healthy donors.coexpressionCOEXPhahtola_mycosis_fungoides_dn
img Genes down-regulated in monolayer (2D) cultures of preinvasive (S3-C) vs invasive (T4-2) breast cancer cells.coexpressionCOEXPrizki_tumor_invasiveness_2d_dn
img Genes down-regulated in mucinous ovarian carcinoma tumors of grades 1 and 2 compared to the normal ovarian survace epithelium tissue.coexpressionCOEXPwamunyokoli_ovarian_cancer_grades_1_2_dn
img Genes down-regulated in mucinous ovarian carcinoma tumors of low malignant potential (LMP) compared to normal ovarian surface epithelium tissue.coexpressionCOEXPwamunyokoli_ovarian_cancer_lmp_dn
img Genes down-regulated in multiple myeloma (MM) bone marrow mesenchymal stem cells.coexpressionCOEXPcorre_multiple_myeloma_dn
img Genes down-regulated in multiple myeloma (MM) cell lines treated with both decitabine [PubChem=451668] TSA [PubChem=5562].coexpressionCOEXPheller_hdac_targets_silenced_by_methylation_dn
img Genes down-regulated in multiple myeloma (MM) compared to monoclonal gammopathy of uncertain significance (MGUS).coexpressionCOEXPdavies_multiple_myeloma_vs_mgus_dn
img Genes down-regulated in multiple myeloma (MM) compared to normal plasma cells from the patient's identical twin.coexpressionCOEXPmunshi_multiple_myeloma_dn
img Genes down-regulated in myeloid progenitor cells isolated from bone marrow of patients with Diamond-Blackfan anemia (DBA) and mutated RPS19 [Gene ID=6223].coexpressionCOEXPgazda_diamond_blackfan_anemia_myeloid_dn
img Genes down-regulated in nasopharyngeal carcinoma (NPC) compared to the normal tissue.coexpressionCOEXPdodd_nasopharyngeal_carcinoma_dn
img Genes down-regulated in nasopharyngeal carcinoma (NPC) positive for LMP1 [Gene ID=9260], a latent gene of Epstein-Barr virus (EBV).coexpressionCOEXPsengupta_nasopharyngeal_carcinoma_with_lmp1_dn
img Genes down-regulated in non-metastatic breast cancer tumors having type 1 amplification in the 20q13 region; involves ZNF217 [Gene ID=7764] locus only.coexpressionCOEXPginestier_breast_cancer_znf217_amplified_dn
img Genes down-regulated in non-neoplastic rectal mucosa samples from patients having cancer associated with ulcerative collitis, compared to those who did not have the cancer.coexpressionCOEXPwatanabe_ulcerative_colitis_with_cancer_dn
img Genes down-regulated in non-spontaneously immortalizing (NSI) primary breast cancer tumor cultures upon expression of TERT [Gene ID=7015] off a retroviral vector.coexpressionCOEXPdairkee_tert_targets_dn
img Genes down-regulated in normal bone marrow plasma cells (BMPC) compared to polyclonal plasmablasts (PPC) that also distinguished multiple myeloma (MM) samples by expression of levels of TACI [Gene ID=23495].coexpressionCOEXPmoreaux_b_lymphocyte_maturation_by_taci_dn
img Genes down-regulated in normal ductal and normal lobular breast cells.coexpressionCOEXPturashvili_breast_normal_ductal_vs_lobular_dn
img Genes down-regulated in normal fibroblasts in response to IL6 [Gene ID=3569].coexpressionCOEXPdasu_il6_signaling_dn
img Genes down-regulated in normal hematopoietic progenitors by RUNX1-RUNX1T1 [Gene ID=861, 862] fusion.coexpressionCOEXPtonks_targets_of_runx1_runx1t1_fusion_hsc_dn
img Genes down-regulated in normal keratinocytes immortalized by infection with the high risk HPV31 (human papilloma virus) strain.coexpressionCOEXPchang_immortalized_by_hpv31_dn
img Genes down-regulated in normal tissue adjacent to liver tumor, compared to the normal liver samples.coexpressionCOEXPacevedo_normal_tissue_adjacent_to_liver_tumor_dn
img Genes down-regulated in nsopharyngeal carcinoma relative to the normal tissue.coexpressionCOEXPsengupta_nasopharyngeal_carcinoma_dn
img Genes down-regulated in oncocytic follicular carcinoma (FTC) vs mitochondrial-rich papillary carcinoma (PTC) types of thyroid cancer.coexpressionCOEXPbaris_thyroid_cancer_dn
img Genes down-regulated in pancreatic cancer cells grown in orthotopic xenograft tumors compared to those grown in vitro.coexpressionCOEXPnakamura_cancer_microenvironment_dn
img Genes down-regulated in pancreatic ductal adenocarcinoma (PDAC) identified in a meta analysis across four independent studies.coexpressionCOEXPgruetzmann_pancreatic_cancer_dn
img Genes down-regulated in papillary thyroid carcinoma (PTC) compared to normal tissue.coexpressionCOEXPdelys_thyroid_cancer_dn
img Genes down-regulated in papillary thyroid carcinoma (PTC) compared to other thyroid tumors.coexpressionCOEXPfontaine_papillary_thyroid_carcinoma_dn
img Genes down-regulated in patients at the incipient stage of Alzheimer's disease.coexpressionCOEXPblalock_alzheimers_disease_incipient_dn
img Genes down-regulated in peripheral blood monocytes by CSF2RB (GM-CSF) [Gene ID=1437] and IL4 [Gene ID=3565].coexpressionCOEXPrutella_response_to_csf2rb_and_il4_dn
img Genes down-regulated in peripheral blood monocytes by HGF [Gene ID=3082].coexpressionCOEXPrutella_response_to_hgf_dn
img Genes down-regulated in peripheral blood mononuclear cells (PBMC) from sickle cell disease patients compared to those from healthy subjects.coexpressionCOEXPjison_sickle_cell_disease_dn
img Genes down-regulated in peripheral blood mononucleocytes by HGF [Gene ID=3082] compared to those regulated by CSF2RB (GM-CSF) [Gene ID=1437] and IL4 [Gene ID=3565].coexpressionCOEXPrutella_response_to_hgf_vs_csf2rb_and_il4_dn
img Genes down-regulated in pilocytic astrocytoma (PA) from supratentorial regions compared to the infratentorial PA tumors.coexpressionCOEXPsharma_pilocytic_astrocytoma_location_dn
img Genes down-regulated in pilocytic astrocytoma compared to glioblastoma samples.coexpressionCOEXPcolin_pilocytic_astrocytoma_vs_glioblastoma_dn
img Genes down-regulated in pirmary cultures of epithelial ovarian cancer (EOC): invasive (TOV) vs low malignant potential (LMP) tumors.coexpressionCOEXPouellet_cultured_ovarian_cancer_invasive_vs_lmp_dn
img Genes down-regulated in plasma cells compared with B lymphocytes.coexpressionCOEXPtarte_plasma_cell_vs_b_lymphocyte_dn
img Genes down-regulated in pleura relapse of breast cancer.coexpressionCOEXPsmid_breast_cancer_relapse_in_pleura_dn
img Genes down-regulated in polymorphonuclear neutrophilic granulocytes (PMNs) attracted to skin wounds.coexpressionCOEXPtheilgaard_neutrophil_at_skin_wound_dn
img Genes down-regulated in polysomal and total RNA samples from SW480 cells (primary colorectal carcinoma, CRC) compared to the SW620 cells (lymph node metastasis from the same individual).coexpressionCOEXPprovenzani_metastasis_dn
img Genes down-regulated in poorly differentiated thyroid carcinoma (PDTC) compared to anaplastic thyroid carcinoma (ATC).coexpressionCOEXProdrigues_thyroid_carcinoma_dn
img Genes down-regulated in poorly differentiated thyroid carcinoma (PDTC) compared to normal thyroid tissue.coexpressionCOEXProdrigues_thyroid_carcinoma_poorly_differentiated_dn
img Genes down-regulated in postmortem brain frontal cortex samples from old subjects compared to those from the young ones.coexpressionCOEXPlu_aging_brain_dn
img Genes down-regulated in primary adipocytes compared to preadipocytes.coexpressionCOEXPurs_adipocyte_differentiation_dn
img Genes down-regulated in primary cultures of ovarian surface epithlium cells exposed to progesterone [PubChem=5994] for 5 days.coexpressionCOEXPwilcox_presponse_to_rogesterone_dn
img Genes down-regulated in primary endothelial cells (HUVEC) after knockdown of WTAP [Gene ID=9589] by RNAi.coexpressionCOEXPhoriuchi_wtap_targets_dn
img Genes down-regulated in primary fibroblast cell culture after infection with HCMV (AD169 strain) at 1 h time point that were not down-regulated at the previous time point, 30 min.coexpressionCOEXPbrowne_hcmv_infection_1hr_dn
img Genes down-regulated in primary fibroblast cell culture after infection with HCMV (AD169 strain) at 10 h time point that were not down-regulated at the previous time point, 8 h.coexpressionCOEXPbrowne_hcmv_infection_10hr_dn
img Genes down-regulated in primary fibroblast cell culture after infection with HCMV (AD169 strain) at 12 h time point that were not down-regulated at the previous time point, 10 h.coexpressionCOEXPbrowne_hcmv_infection_12hr_dn
img Genes down-regulated in primary fibroblast cell culture after infection with HCMV (AD169 strain) at 14 h time point that were not down-regulated at the previous time point, 12 h.coexpressionCOEXPbrowne_hcmv_infection_14hr_dn
img Genes down-regulated in primary fibroblast cell culture after infection with HCMV (AD169 strain) at 16 h time point that were not down-regulated at the previous time point, 14 h.coexpressionCOEXPbrowne_hcmv_infection_16hr_dn
img Genes down-regulated in primary fibroblast cell culture after infection with HCMV (AD169 strain) at 18 h time point that were not down-regulated at the previous time point, 16 h.coexpressionCOEXPbrowne_hcmv_infection_18hr_dn
img Genes down-regulated in primary fibroblast cell culture after infection with HCMV (AD169 strain) at 20 h time point that were not down-regulated at the previous time point, 18 h.coexpressionCOEXPbrowne_hcmv_infection_20hr_dn
img Genes down-regulated in primary fibroblast cell culture after infection with HCMV (AD169 strain) at 24 h time point that were not down-regulated at the previous time point, 20 h.coexpressionCOEXPbrowne_hcmv_infection_24hr_dn
img Genes down-regulated in primary fibroblast cell culture after infection with HCMV (AD169 strain) at 48 h time point that were not down-regulated at the previous time point, 24 h.coexpressionCOEXPbrowne_hcmv_infection_48hr_dn
img Genes down-regulated in primary fibroblast cell culture at 30 min time point after infection with HCMV (AD169 strain).coexpressionCOEXPbrowne_hcmv_infection_30min_dn
img Genes down-regulated in primary fibroblast cell culture point after infection with HCMV (AD169 strain) at 2 h time point that were not down-regulated at the previous time point, 1 h.coexpressionCOEXPbrowne_hcmv_infection_2hr_dn
img Genes down-regulated in primary fibroblast cell culture point after infection with HCMV (AD169 strain) at 4 h time point that were not down-regulated at the previous time point, 2 h.coexpressionCOEXPbrowne_hcmv_infection_4hr_dn
img Genes down-regulated in primary fibroblast cell culture point after infection with HCMV (AD169 strain) at 6 h time point that were not down-regulated at the previous time point, 4 h.coexpressionCOEXPbrowne_hcmv_infection_6hr_dn
img Genes down-regulated in primary fibroblast cell culture point after infection with HCMV (AD169 strain) at 8 h time point that were not down-regulated at the previous time point, 6 h.coexpressionCOEXPbrowne_hcmv_infection_8hr_dn
img Genes down-regulated in primary fibroblasts from Rett syndrom patients who carry mutations inactivating MECP2 [Gene ID=4204].coexpressionCOEXPtraynor_rett_syndrom_dn
img Genes down-regulated in primary granulosa cells after stimulation with LH or FSH gonadotrophic hormones for 24 h.coexpressionCOEXPsasson_response_to_gonadotrophins_dn
img Genes down-regulated in primary granulosa cells in response to forskolin [PubChem=47936].coexpressionCOEXPsasson_response_to_forskolin_dn
img Genes down-regulated in primary hepatocytes and Hep3B (hepatocyte) cells in response to IFNA [Gene ID=3439].coexpressionCOEXPradaeva_response_to_ifna1_dn
img Genes down-regulated in primary keratinocytes at 1 h after UVB irradiation.coexpressionCOEXPmurakami_uv_response_1hr_dn
img Genes down-regulated in primary keratinocytes at 24 h after UVB irradiation.coexpressionCOEXPmurakami_uv_response_24hr
img Genes down-regulated in primary keratinocytes at 6 h after UVB irradiation.coexpressionCOEXPmurakami_uv_response_6hr_dn
img Genes down-regulated in primary keratinocytes by expression of constantly active NOTCH1 [Gene ID=4851].coexpressionCOEXPnguyen_notch1_targets_dn
img Genes down-regulated in primary keratinocytes by expression of p50 (NFKB1) and p65 (RELA) [Gene ID=4790, 5970] components of NFKB.coexpressionCOEXPhinata_nfkb_targets_keratinocyte_dn
img Genes down-regulated in primary tissue culture of epidermal kerationcytes after UVB irradiation.coexpressionCOEXPtakao_response_to_uvb_radiation_dn
img Genes down-regulated in prostate cancer samples bearing the fusion of TMPRSS2 with ERG [Gene ID=7113, 2078].coexpressionCOEXPsetlur_prostate_cancer_tmprss2_erg_fusion_dn
img Genes down-regulated in prostate cancer samples from African-American patients compared to those from the European-American patients.coexpressionCOEXPwallace_prostate_cancer_race_dn
img Genes down-regulated in prostate cancer samples.coexpressionCOEXPliu_prostate_cancer_dn
img Genes down-regulated in prostate cancer vs benign prostate tissue, based on a meta-analysis of five gene expression profiling studies.coexpressionCOEXPtomlins_prostate_cancer_dn
img Genes down-regulated in prostate tumor vs normal tissue samples.coexpressionCOEXPwallace_prostate_cancer_dn
img Genes down-regulated in pulpal tissue extracted from carious teeth.coexpressionCOEXPmclachlan_dental_caries_dn
img Genes down-regulated in quescent CD34+ [Gene ID=8842] cells isolated from peripheral blood of CML (chronic myeloblastic leukemia) patients compared to the dividing cells from normal donors.coexpressionCOEXPgraham_cml_quiescent_vs_normal_dividing_dn
img Genes down-regulated in quiescent (G0) CD34+ [Gene ID=8842] cells isolated from peripheral blood of CML (chronic myeloid leukemia) patients compared to the quiescent cells from normal donors.coexpressionCOEXPgraham_cml_quiescent_vs_normal_quiescent_dn
img Genes down-regulated in quiescent (G0) vs dividing (M) CD34+ [Gene ID=8842] cells isolated from peripheral blood of CML (chronic myeloid leukemia) patients.coexpressionCOEXPgraham_cml_quiescent_vs_cml_dividing_dn
img Genes down-regulated in quiescent CD34+ [Gene ID=8842] cells isolated from peripheral blood of normal donors compared to the dividing cells from CML (chronic myeloid leukemia) patients.coexpressionCOEXPgraham_cml_dividing_vs_normal_quiescent_dn
img Genes down-regulated in quiescent vs dividing CD34+ [Gene ID=8842] cells isolated from peripheral blood of normal donors.coexpressionCOEXPgraham_normal_quiescent_vs_normal_dividing_dn
img Genes down-regulated in rectal but up-regulated in colon carcinoma compared to normal mucosa samples.coexpressionCOEXPgrade_colon_vs_rectal_cancer_dn
img Genes down-regulated in rectal cancer patients resistant to radiotherapy (non-responders) relative to the sensitive ones (responders).coexpressionCOEXPwatanabe_rectal_cancer_radiotherapy_responsive_dn
img Genes down-regulated in response to UVB radiation in HFK cells (keratinocytes) immortalized by overexpression of HPV E6 and E7 viral oncogenes.coexpressionCOEXPsimbulan_uv_response_immortalized_dn
img Genes down-regulated in response to both hypoxia and overexpression of an active form of HIF1A [Gene ID=3091].coexpressionCOEXPmanalo_hypoxia_dn
img Genes down-regulated in response to nutlin-3a [PubChem=216345], an inhibitor of MDM2 [Gene ID=4193], in skin fibroblast cultures after knockdown of TP53 [Gene ID=7157] by RNAi.coexpressionCOEXPkumamoto_response_to_nutlin_3a_dn
img Genes down-regulated in robust Cluster 2 (rC2) of hepatoblastoma samples compared to those in the robust Cluster 1 (rC1).coexpressionCOEXPcairo_hepatoblastoma_classes_dn
img Genes down-regulated in samples from patients with recurrent hepatocellular carcinoma (HCC).coexpressionCOEXPwang_recurrent_liver_cancer_dn
img Genes down-regulated in samples with systolic heart failure compared to normal hearts.coexpressionCOEXPthum_systolic_heart_failure_dn
img Genes down-regulated in secondary APL (acute promyelocytic leukemia) compared to the de novo tumors.coexpressionCOEXPcasorelli_apl_secondary_vs_de_novo_dn
img Genes down-regulated in senescent cells.coexpressionCOEXPfridman_senescence_dn
img Genes down-regulated in serrated vs conventional colorectal carcinoma (CRC) samples.coexpressionCOEXPlaiho_colorectal_cancer_serrated_dn
img Genes down-regulated in the 5637 cell line (bladder cancer) after knockdown of E2F3 [Gene ID=1871] by RNAi.coexpressionCOEXPolsson_e2f3_targets_dn
img Genes down-regulated in the A673 cells (Ewing sarcoma) after double knockdown of both FLI1 and DAX1 [Gene ID=2313, 190] by RNAi.coexpressionCOEXPgarcia_targets_of_fli1_and_dax1_dn
img Genes down-regulated in the ANBL-6 cell line (multiple myeloma, MM) after withdrawal of IL6 [Gene ID=3569].coexpressionCOEXPcroonquist_il6_deprivation_dn
img Genes down-regulated in the Ad/AH cells (adenocarcinoma) engineered to stably express the Epstein-Barr virus (EBV) gene EBNA1.coexpressionCOEXPwood_ebv_ebna1_targets_dn
img Genes down-regulated in the MM1S cells (multiple myeloma) after treatment with aplidin [PubChem=44152164], a marine-derived compound with potential anti-cancer properties.coexpressionCOEXPmitsiades_response_to_aplidin_dn
img Genes down-regulated in the RCC4 cells (renal cell carcinoma, RCC) expressing VHL [Gene ID=7428] mutants Type 1 and 2B (associated with RCC) but not those of Type 2A and 2C (not associated with RCC).coexpressionCOEXPabdulrahman_kidney_cancer_vhl_dn
img Genes down-regulated in the common lymphoid progenitor (CLP, defined as CD34+CD38-CD7+ [Gene ID=947, 952, 924]) compared to a multipotent cord blood cell (defined as CD34+CD38+CD7-).coexpressionCOEXPhoebeke_lymphoid_stem_cell_dn
img Genes down-regulated in the erbb2 subype of breast cancer samples, characterized by higher expression of ERBB2 [Gene ID=2064].coexpressionCOEXPsmid_breast_cancer_erbb2_dn
img Genes down-regulated in the invasive ductal carcinoma (IDC) compared to the invasive lobular carcinoma (ILC), the two major pathological types of breast cancer.coexpressionCOEXPbertucci_invasive_carcinoma_ductal_vs_lobular_dn
img Genes down-regulated in the luminal A subtype of breast cancer.coexpressionCOEXPsmid_breast_cancer_luminal_a_dn
img Genes down-regulated in the luminal B subtype of breast cancer.coexpressionCOEXPsmid_breast_cancer_luminal_b_dn
img Genes down-regulated in the neural crest stem cells (NCS), defined as p75+/HNK1+ [Gene ID=4804, 27087].coexpressionCOEXPlee_neural_crest_stem_cell_dn
img Genes down-regulated in the normal-like subtype of breast cancer.coexpressionCOEXPsmid_breast_cancer_normal_like_dn
img Genes down-regulated in the temporal cortex samples from patients with major depressive disorder.coexpressionCOEXPaston_major_depressive_disorder_dn
img Genes down-regulated in the ventricles of failing hearts (DCM and ICM) compared to the healthy controls.coexpressionCOEXPkaab_failed_heart_ventricle_dn
img Genes down-regulated in three-dimentional (3D) cultures of preinvasive (S3-C) vs invasive (T4-2) breast cancer cells.coexpressionCOEXPrizki_tumor_invasiveness_3d_dn
img Genes down-regulated in thyroid tumors of uncertain malignancy (T-UM) compared to other thyroid tumors.coexpressionCOEXPfontaine_thyroid_tumor_uncertain_malignancy_dn
img Genes down-regulated in tumor compared to non-tumor liver samples from patients with hepatocellular carcinoma (HCC).coexpressionCOEXPlee_liver_cancer
img Genes down-regulated in tumor-adjacent liver tissue, which is asociated with intrahepatic metastasis of hepatocellular carcinomacoexpressionCOEXPbudhu_liver_cancer_metastasis_dn
img Genes down-regulated in unstable ateroslerotic plaques compared to the stable ones.coexpressionCOEXPpapaspyridonos_unstable_aterosclerotic_plaque_dn
img Genes down-regulated in urothelial cell carcinoma (UCC) tumors with LOH on 9q as compared to the tumors showing retention.coexpressionCOEXPlindgren_bladder_cancer_with_loh_in_chr9q
img Genes down-regulated in uterine fibroids vs normal myometrium samples.coexpressionCOEXPvanharanta_uterine_fibroid_dn
img Genes down-regulated in uterine fibroids with deletions in the 7q region vs those without the deletion.coexpressionCOEXPvanharanta_uterine_fibroid_with_7q_deletion_dn
img Genes down-regulated in uveal melanoma: class 2 vs class 1 tumors.coexpressionCOEXPonken_uveal_melanoma_dn
img Genes down-regulated late in HMEC cells (mammary epithelium) during acinar development in vitro.coexpressionCOEXPfournier_acinar_development_late_dn
img Genes down-regulated more than two-fold in lymphoblastoid cell lines from European population compared to those from Asian population.coexpressionCOEXPspielman_lymphoblast_european_vs_asian_2fc_dn
img Genes down-regulated synergistically in NB4 cells (acute promyelocytic leukemia, APL) by tretinoin and NSC682994 [PubChem=5538, 388304].coexpressionCOEXPxu_response_to_tretinoin_and_nsc682994_dn
img Genes down-rgulated in CD34+ [Gene ID=947] hematopoetic cells by expression of NUP98-HOXA9 fusion [Gene ID=4928, 3205] off a retroviral vector at 6h.coexpressionCOEXPtakeda_targets_of_nup98_hoxa9_fusion_6hr_dn
img Genes downregulated in MCF10A cells (breast cancer) co-cultured with cancer-associated fibroblasts (CAF).coexpressionCOEXPlin_silenced_by_tumor_microenvironment
img Genes downstream of CDKN1A [Gene ID=1026] in a TP53 [Gene ID=7157] independent pathway in 2774qw1 cells (ovarian cancer).coexpressionCOEXPwu_apoptosis_by_cdkn1a_not_via_tp53
img Genes downstream of both CDKN1A and TP53 [Gene ID=1026, 7157] in 2774qw1 cells (ovarian cancer).coexpressionCOEXPwu_apoptosis_by_cdkn1a_via_tp53
img Genes dpwn-regulated in P493-6 cells (B lymphocyte) upon knockdown of TFRC [Gene ID=7037] by RNAi.coexpressionCOEXPodonnell_tfrc_targets_dn
img Genes encoding IkappaB kinase (IKK) interacting proteins.coexpressionCOEXPscheidereit_ikk_interacting_proteins
img Genes encoding substrates of IkappaB kinase (IKK) complex.coexpressionCOEXPscheidereit_ikk_targets
img Genes encoding the NF-kB core signaling proteins.coexpressionCOEXPgilmore_core_nfkb_pathway
img Genes enriched at every T lymphocyte differentiation stage compared to the early passage fetal thymic stromal cultures (TSC).coexpressionCOEXPlee_differentiating_t_lymphocyte
img Genes enriched in pluripotent adult germline stem cells.coexpressionCOEXPconrad_germline_stem_cell
img Genes enriched in the double polar (DP) thymocyte compared to all other T lymphocyte differentiation stages.coexpressionCOEXPlee_double_polar_thymocyte
img Genes enriched in the intrathymic T progenitor (ITTP) cells compared to all other T lymphocyte differentiation stages.coexpressionCOEXPlee_intrathymic_t_progenitor
img Genes enriched in the naive circulating T lymphocytes compared to the earlier differentiation stages.coexpressionCOEXPlee_naive_t_lymphocyte
img Genes enriched in the single positive 4 (SP4) thymocytes compared to all other T lymphocyte differentiation stages.coexpressionCOEXPlee_sp4_thymocyte
img Genes essential to the development of megakaryocytes, as expressed in normal cells and essential thrombocythemic cells (ET).coexpressionCOEXPtenedini_megakaryocyte_markers
img Genes exclusively down-regulated in B lymphocytes from CLL (chronic lymphocytic leukemia) patients but with a similiar expression pattern in the normal cells and in the cells from WM (Waldenstroem's macroblobulinemia) patients.coexpressionCOEXPgutierrez_chronic_lymphocytic_leukemia_dn
img Genes exclusively down-regulated in B lymphocytes from WM (Waldenstroem's macroblobulinemia) patients but with a similiar expression pattern in the normal cells and in the cells from CLL (chronic lymphocytic leukemia) patients.coexpressionCOEXPgutierrez_waldenstroems_macroglobulinemia_1_dn
img Genes exclusively down-regulated in fibroblasts expressing the TTD mutant form of ERCC3 [Gene ID=2071], after UVC irradiation.coexpressionCOEXPdacosta_uv_response_via_ercc3_ttd_dn
img Genes exclusively down-regulated in fibroblasts expressing the XP/CS mutant form of ERCC3 [Gene ID=2071] after high dose UVC irradiation.coexpressionCOEXPdacosta_uv_response_via_ercc3_xpcs_dn
img Genes exclusively down-regulated in plasma cells from MM (multiple myeloma) patients but with a similiar expression pattern in the normal cells and in the cells from WM (Waldenstroem's macroblobulinemia) patients.coexpressionCOEXPgutierrez_multiple_myeloma_dn
img Genes exclusively up-regulated in B lymphocytes from CLL (chronic lymphocytic leukemia) patients but with a similiar expression pattern in the normal cells and in the cells from WM (Waldenstroem's macroblobulinemia) patients.coexpressionCOEXPgutierrez_chronic_lymphocytic_leukemia_up
img Genes exclusively up-regulated in B lymphocytes from WM (Waldenstroem's macroblobulinemia) patients but with a similiar expression pattern in the normal cells and in the cells from CLL (chronic lymphocytic leukemia) patients.coexpressionCOEXPgutierrez_waldenstroems_macroglobulinemia_1_up
img Genes exclusively up-regulated in B lymphocytes from WM (Waldenstroem's macroglobulinemia) but with a similar expression profile in MM (macroglobulinemia) and normal cells.coexpressionCOEXPgutierrez_waldenstroems_macroglobulinemia_2
img Genes exclusively up-regulated in fibroblasts expressing the TTD mutant form of ERCC3 [Gene ID=2071], after UVC irradiation.coexpressionCOEXPdacosta_uv_response_via_ercc3_ttd_up
img Genes exclusively up-regulated in fibroblasts expressing the XP/CS mutant form of ERCC3 [Gene ID=2071] after high dose UVC irradiation.coexpressionCOEXPdacosta_uv_response_via_ercc3_xpcs_up
img Genes exclusively up-regulated in plasma cells from MM (multiple myeloma) patients but with a similiar expression pattern in the normal cells and in the cells from WM (Waldenstroem's macroblobulinemia) patients.coexpressionCOEXPgutierrez_multiple_myeloma_up
img Genes expressed in at least one prostate cancer cell line but not in normal prostate epithelial cells or stromal cellscoexpressionCOEXPyegnasubramanian_prostate_cancer
img Genes expressed in multiple myeloma (MM) patients carrying specific translocations involving the immunoglobulin heavy chain (IGH) locus at 14q32.coexpressionCOEXPmattioli_multiple_myeloma_with_14q32_translocations
img Genes expressed in normal colon; they undergo down-regulation in tumors through DNA methylation.coexpressionCOEXPschlesinger_methylated_in_colon_cancer
img Genes for which mutations result in atrial septation defects, a major class of congenital heart disease.coexpressionCOEXPbruneau_septation_atrial
img Genes for which mutations result in developmental defects in the great vessels formation and valvulogenesis, a major class of congenital heart disease.coexpressionCOEXPbruneau_heart_great_vessels_and_valvulogenesis
img Genes for which mutations result in developmental defects in ventricular septation and atrioventricular cushion formation, a major class of congenital heart disease.coexpressionCOEXPbruneau_septation_ventricular
img Genes from 'subtype S1' signature of hepatocellular carcinoma (HCC): aberrant activation of the WNT signaling pathway.coexpressionCOEXPhoshida_liver_cancer_subclass_s1
img Genes from 'subtype S2' signature of hepatocellular carcinoma (HCC): proliferation, MYC and AKT1 [Gene ID=4609, 207] activation.coexpressionCOEXPhoshida_liver_cancer_subclass_s2
img Genes from 'subtype S3' signature of hepatocellular carcinoma (HCC): hepatocyte differentiation.coexpressionCOEXPhoshida_liver_cancer_subclass_s3
img Genes from 16q24 region up-regulated in retinoblastoma tumors with 16q24 LOH (loss of heterozygocity) compared to those without the LOH.coexpressionCOEXPgratias_retinoblastoma_16q24
img Genes from chromosomal copy number gains in a panel of 51 primary colon carcinoma samples.coexpressionCOEXPcamps_colon_cancer_copy_number_up
img Genes from chromosomal copy number losses in a panel of 51 primary colon carcinoma samples.coexpressionCOEXPcamps_colon_cancer_copy_number_dn
img Genes from common genomic gains observed in a meta analyis of copy number alterations across a panel of different cancer cell lines and tumor samples.coexpressionCOEXPgreshock_cancer_copy_number_up
img Genes from common genomic losses observed in a meta analyis of copy number alterations across a panel of different cancer cell lines and tumor samples.coexpressionCOEXPgreshock_cancer_copy_number_dn
img Genes from common regions of gains observed in more than 15% of 148 primary breast cancer tumors.coexpressionCOEXPchin_breast_cancer_copy_number_up
img Genes from common regions of losses observed in more than 15% of 148 primary breast cancer tumors.coexpressionCOEXPchin_breast_cancer_copy_number_dn
img Genes from selected recurrently amplified regions in bone tissue tumors with supernumerary ring chromosomes.coexpressionCOEXPheidenblad_amplified_in_bone_cancer
img Genes from selected recurrently amplified regions in soft tissue tumors with supernumerary ring chromosomes.coexpressionCOEXPheidenblad_amplified_in_soft_tissue_cancer
img Genes from the 12p region that down-regulated in teratoma cells compared to normal testis.coexpressionCOEXPkorkola_teratoma_dn
img Genes from the 12p region that up-regulated in teratoma cells compared to normal testis.coexpressionCOEXPkorkola_teratoma_up
img Genes from the 12p region that were down-regulated in choriocarcinoma cells compared to normal testis.coexpressionCOEXPkorkola_choriocarcinoma_dn
img Genes from the 12p region that were down-regulated in embryonic carcinoma tumors compared to normal tissue.coexpressionCOEXPkorkola_embryonal_carcinoma_dn
img Genes from the 12p region that were down-regulated in seminoma tumors compared to normal testis.coexpressionCOEXPkorkola_seminoma_dn
img Genes from the 12p region that were down-regulated in yolk sac tumor cells compared to normal testis.coexpressionCOEXPkorkola_yolk_sac_tumor_dn
img Genes from the 12p region that were up-regulated in choriocarcinoma cells compared to normal testis.coexpressionCOEXPkorkola_choriocarcinoma_up
img Genes from the 12p region that were up-regulated in embryonic carcinoma tumors compared to normal testis.coexpressionCOEXPkorkola_embryonal_carcinoma_up
img Genes from the 12p region that were up-regulated in seminoma tumors compared to normal testis.coexpressionCOEXPkorkola_seminoma_up
img Genes from the 12p region that were up-regulated in yolk sac tumor cells compared to normal testis.coexpressionCOEXPkorkola_yolk_sac_tumor_up
img Genes from the 254-gene classifier which were down-regulated in melanoma patients with a reported distant metastasis within 4 years.coexpressionCOEXPwinnepenninckx_melanoma_metastasis_dn
img Genes from the 254-gene classifier which were up-regulated in melanoma patients with a reported distant metastasis within 4 years.coexpressionCOEXPwinnepenninckx_melanoma_metastasis_up
img Genes from the black module which are down-regulated in HAEC cells (primary aortic endothelium) after exposure to the oxidized 1-palmitoyl-2-arachidonyl-sn-3-glycerophosphorylcholine (oxPAPC).coexpressionCOEXPgargalovic_response_to_oxidized_phospholipids_black_dn
img Genes from the black module which are up-regulated in HAEC cells (primary aortic endothelium) after exposure to the oxidized 1-palmitoyl-2-arachidonyl-sn-3-glycerophosphorylcholine (oxPAPC).coexpressionCOEXPgargalovic_response_to_oxidized_phospholipids_black_up
img Genes from the blue module which are down-regulated in HAEC cells (primary aortic endothelium) after exposure to the oxidized 1-palmitoyl-2-arachidonyl-sn-3-glycerophosphorylcholine (oxPAPC).coexpressionCOEXPgargalovic_response_to_oxidized_phospholipids_blue_dn
img Genes from the blue module which are up-regulated in HAEC cells (primary aortic endothelium) after exposure to the oxidized 1-palmitoyl-2-arachidonyl-sn-3-glycerophosphorylcholine (oxPAPC).coexpressionCOEXPgargalovic_response_to_oxidized_phospholipids_blue_up
img Genes from the green module which are down-regulated in HAEC cells (primary aortic endothelium) after exposure to the oxidized 1-palmitoyl-2-arachidonyl-sn-3-glycerophosphorylcholine (oxPAPC).coexpressionCOEXPgargalovic_response_to_oxidized_phospholipids_green_dn
img Genes from the green module which are up-regulated in HAEC cells (primary aortic endothelium) after exposure to the oxidized 1-palmitoyl-2-arachidonyl-sn-3-glycerophosphorylcholine (oxPAPC).coexpressionCOEXPgargalovic_response_to_oxidized_phospholipids_green_up
img Genes from the grey module which are down-regulated in HAEC cells (primary aortic endothelium) after exposure to the oxidized 1-palmitoyl-2-arachidonyl-sn-3-glycerophosphorylcholine (oxPAPC).coexpressionCOEXPgargalovic_response_to_oxidized_phospholipids_grey_dn
img Genes from the grey module which are up-regulated in HAEC cells (primary aortic endothelium) after exposure to the oxidized 1-palmitoyl-2-arachidonyl-sn-3-glycerophosphorylcholine (oxPAPC).coexpressionCOEXPgargalovic_response_to_oxidized_phospholipids_grey_up
img Genes from the lightyellow module which are down-regulated in HAEC cells (primary aortic endothelium) after exposure to the oxidized 1-palmitoyl-2-arachidonyl-sn-3-glycerophosphorylcholine (oxPAPC).coexpressionCOEXPgargalovic_response_to_oxidized_phospholipids_lightyellow_dn
img Genes from the lightyellow module which are up-regulated in HAEC cells (primary aortic endothelium) after exposure to the oxidized 1-palmitoyl-2-arachidonyl-sn-3-glycerophosphorylcholine (oxPAPC).coexpressionCOEXPgargalovic_response_to_oxidized_phospholipids_lightyellow_up
img Genes from the magenta module which are down-regulated in HAEC cells (primary aortic endothelium) after exposure to the oxidized 1-palmitoyl-2-arachidonyl-sn-3-glycerophosphorylcholine (oxPAPC).coexpressionCOEXPgargalovic_response_to_oxidized_phospholipids_magenta_dn
img Genes from the magenta module which are up-regulated in HAEC cells (primary aortic endothelium) after exposure to the oxidized 1-palmitoyl-2-arachidonyl-sn-3-glycerophosphorylcholine (oxPAPC).coexpressionCOEXPgargalovic_response_to_oxidized_phospholipids_magenta_up
img Genes from the most frequent genomic gains and amplifications in a panel of patients with lymph node negative breast cancer (NNBC).coexpressionCOEXPcliment_breast_cancer_copy_number_up
img Genes from the most frequent genomic losses and homozygous deletions in a panel of patients with lymph node negative breast cancer (NNBC).coexpressionCOEXPcliment_breast_cancer_copy_number_dn
img Genes from the recurrent amplicons in 89 samples of oral squamous cell carcinoma (SCC).coexpressionCOEXPsnijders_amplified_in_head_and_neck_tumors
img Genes from the red module which are down-regulated in HAEC cells (primary aortic endothelium) after exposure to the oxidized 1-palmitoyl-2-arachidonyl-sn-3-glycerophosphorylcholine (oxPAPC).coexpressionCOEXPgargalovic_response_to_oxidized_phospholipids_red_dn
img Genes from the red module which are up-regulated in HAEC cells (primary aortic endothelium) after exposure to the oxidized 1-palmitoyl-2-arachidonyl-sn-3-glycerophosphorylcholine (oxPAPC).coexpressionCOEXPgargalovic_response_to_oxidized_phospholipids_red_up
img Genes from the turquoise module which are down-regulated in HAEC cells (primary aortic endothelium) after exposure to the oxidized 1-palmitoyl-2-arachidonyl-sn-3-glycerophosphocholine (oxPAPC).coexpressionCOEXPgargalovic_response_to_oxidized_phospholipids_turquoise_dn
img Genes from the turquoise module which are up-regulated in HAEC cells (primary aortic endothelium) after exposure to the oxidized 1-palmitoyl-2-arachidonyl-sn-3-glycerophosphocholine (oxPAPC).coexpressionCOEXPgargalovic_response_to_oxidized_phospholipids_turquoise_up
img Genes from the yellow module which are down-regulated in HAEC cells (primary aortic endothelium) after exposure to the oxidized 1-palmitoyl-2-arachidonyl-sn-3-glycerophosphorylcholine (oxPAPC).coexpressionCOEXPgargalovic_response_to_oxidized_phospholipids_yellow_dn
img Genes from the yellow module which are up-regulated in HAEC cells (primary aortic endothelium) after exposure to the oxidized 1-palmitoyl-2-arachidonyl-sn-3-glycerophosphorylcholine (oxPAPC).coexpressionCOEXPgargalovic_response_to_oxidized_phospholipids_yellow_up
img Genes genes down-regulated in NT2/D1 cells (embryonal carcinoma) in response to treatment with cisplatin [PubChem=2767].coexpressionCOEXPkerley_response_to_cisplatin_dn
img Genes genes up-regulated in NT2/D1 cells (embryonal carcinoma) in response to treatment with cisplatin [PubChem=2767].coexpressionCOEXPkerley_response_to_cisplatin_up
img Genes higher expressed in the best 25 mesothelioma survivors compared to the 25 worst ones.coexpressionCOEXPlopez_mesothelioma_survival_worst_vs_best_dn
img Genes higher expressed in the worst 25 mesothelioma survivors compared to the 25 best ones.coexpressionCOEXPlopez_mesothelioma_survival_worst_vs_best_up
img Genes highly expressed in hepatocellular carcinoma with good survival.coexpressionCOEXPlee_liver_cancer_survival_up
img Genes highly expressed in hepatocellular carcinoma with poor survival.coexpressionCOEXPlee_liver_cancer_survival_dn
img Genes identi???ed as hypermethylated in SW48 cells (colon cancer).coexpressionCOEXPweber_methylated_in_colon_cancer
img Genes identified by ChIP within the high-affinity group of MYC [Gene ID=4609] targets.coexpressionCOEXPfernandez_bound_by_myc
img Genes identified by method 2 as coordinately down-regulated late in HMEC cells (mammary epithelium) during acinar development in vitro.coexpressionCOEXPfournier_acinar_development_late_2
img Genes identified by subtractive hybridization comparing malignant and benign components of a hepatocellular carcinoma (HCC) in a pre-existing liver adenoma in a morphologically normal liver.coexpressionCOEXPcavard_liver_cancer_malignant_vs_benign
img Genes identified with the Fanconi anemia (FA) and the FA pathway.coexpressionCOEXPmathew_fanconi_anemia_genes
img Genes in a cCDNA library from hematopoietic stem cells (HSC) after subtraction of lineage-specific markers.coexpressionCOEXPpark_hsc_markers
img Genes in discrete regions of gain within 16q region detected in individual invasive breast cancer tumors.coexpressionCOEXProylance_breast_cancer_16q_copy_number_up
img Genes in discrete regions of loss within 16q region detected in individual invasive breast cancer tumors.coexpressionCOEXProylance_breast_cancer_16q_copy_number_dn
img Genes in hepatocellular carcinoma (HCC) subclass G2, defined by unsupervised clustering.coexpressionCOEXPboyault_liver_cancer_subclass_g2
img Genes in the AKT1 [Gene ID=207] pathway which are independent of MTOR [Gene ID=2475], insensitive to RAD001 (everolimus) [PubChem=6442177].coexpressionCOEXPcreighton_akt1_signaling_via_mtor_up
img Genes in the AKT1 [Gene ID=207] pathway which depend on MTOR [Gene ID=2475], sensitive to RAD001 (everolimus) [PubChem=6442177].coexpressionCOEXPcreighton_akt1_signaling_via_mtor_dn
img Genes in the blue cluster of protein kinases distinguishing between luminal A and basal breast cancer subtypes.coexpressionCOEXPfinetti_breast_cancers_kinome_blue
img Genes in the gray cluster of protein kinases distinguishing between luminal A and basal breast cancer subtypes.coexpressionCOEXPfinetti_breast_cancers_kinome_gray
img Genes in the green cluster of protein kinases distinguishing between luminal A and basal breast cancer subtypes.coexpressionCOEXPfinetti_breast_cancer_kinome_green
img Genes in the most frequently gained loci in a panel of glioma cell lines.coexpressionCOEXProversi_glioma_copy_number_up
img Genes in the most frequently heterozygous deleted loci of a panel of glioma cell lines.coexpressionCOEXProversi_glioma_loh_regions
img Genes in the most frequently homozygous deleted loci in a panel of glioma cell lines.coexpressionCOEXProversi_glioma_copy_number_dn
img Genes in the red cluster of protein kinases distinguishing between luminal A and basal breast cancer subtypes.coexpressionCOEXPfinetti_breast_cancer_kinome_red
img Genes in the smallest region of deletion (SRD) in 1p36.3 area in neuroblastoma samples.coexpressionCOEXPokawa_neuroblastoma_1p36_31_deletion
img Genes in the stroma-derived prognostic predictor of breast cancer disease outcome.coexpressionCOEXPfinak_breast_cancer_sdpp_signature
img Genes in this set correspond to the most abuntant transcripts that are also specific to platelets.coexpressionCOEXPraghavachari_platelet_specific_genes
img Genes induced in the liver during hepatitis B (HBV) viral clearance in chimpanzees.coexpressionCOEXPwieland_up_by_hbv_infection
img Genes involved in DNA repair, compiled manually by the authors.coexpressionCOEXPkauffmann_dna_repair_genes
img Genes involved in DNA replication, compiled manually by the authors.coexpressionCOEXPkauffmann_dna_replication_genes
img Genes involved in cell cycle regulation which were up-regulated in MCF-7 cells (breast cancer) by tretinoin (retinoic acid) [PubChem=5538].coexpressionCOEXPdonato_cell_cycle_tretinoin
img Genes involved in free fatty acid oxidation; based on literature and sequence annotation resources and coverted to Affymetrix HG-U133A probe sets.coexpressionCOEXPmootha_ffa_oxydation
img Genes involved in gluconeogenesis; based on literature and sequence annotation resources and converted to Affymetrix HG-U133A probe sets.coexpressionCOEXPmootha_gluconeogenesis
img Genes involved in glycogen metabolism; based on literature and sequence annotation resources and converted to Affymetrix HG-U133A probe sets.coexpressionCOEXPmootha_glycogen_metabolism
img Genes involved in glycolysis; based on literature and sequence annotation resources and converted to Affymetrix HG-U133A probe sets.coexpressionCOEXPmootha_glycolysis
img Genes involved in oxidative phosphorylation; based on literature and sequence annotation resources and converted to Affymetrix HG-U133A probe sets.coexpressionCOEXPmootha_voxphos
img Genes involved in pyruvate metabolism; based on literature and sequence annotation resources and converted to Affymetrix HG-U133A probe sets.coexpressionCOEXPmootha_pyr
img Genes known to be induced by hypoxiacoexpressionCOEXPharris_hypoxia
img Genes linked to the ECM maintenance and angiogenesis that were changed in HT1080 cells (fibrosarcoma) over-expressing MMP14 [Gene ID=4323] compared to those with knockdown of the gene by RNAi.coexpressionCOEXProzanov_mmp14_targets_subset
img Genes mapped to core duplicons - elements shared by a majority of segmental duplication blocks.coexpressionCOEXPjiang_core_duplicon_genes
img Genes methylated aberrantly in HCT116 and Colo320 (colon cancer) cells.coexpressionCOEXPlopes_methylated_in_colon_cancer_up
img Genes modulated in HeLa cells (cervical carcinoma) by TNF [Gene ID=7124] not via NFKB pathway.coexpressionCOEXPtian_tnf_signaling_not_via_nfkb
img Genes modulated in HeLa cells (cervical carcinoma) by TNF [Gene ID=7124] via NFKB pathway.coexpressionCOEXPtian_tnf_signaling_via_nfkb
img Genes most down-regulated in hypoxia tolerant NCI H460 cells (lung cancer).coexpressionCOEXPweinmann_adaptation_to_hypoxia_dn
img Genes most profoundly induced in HUVEC cells (endothelium) by VEGFA [Gene ID=7422].coexpressionCOEXPabe_vegfa_targets
img Genes most significantly down-regulated in multiple myeloma samples, compared to normal bone marrow plasma cells.coexpressionCOEXPzhan_multiple_myeloma_dn
img Genes most significantly up-regulated in multiple myeloma samples, compared to normal bone marrow plasma cells.coexpressionCOEXPzhan_multiple_myeloma_up
img Genes most up-regulated in hypoxia tolerant NCI H460 cells (lung cancer).coexpressionCOEXPweinmann_adaptation_to_hypoxia_up
img Genes mutated in colon cancer cell lines, identified using the GINI method described in the paper.coexpressionCOEXPivanov_mutated_in_colon_cancer
img Genes negatively correlated with amplifications of MYCN [Gene ID=4613] in the SCLC (small cell lung cancer) cell lines.coexpressionCOEXPkim_mycn_amplification_targets_dn
img Genes negatively correlated with amplifications of MYC [Gene ID=4609] in SCLC (small cell lung cancer) cell lines.coexpressionCOEXPkim_myc_amplification_targets_dn
img Genes negatively correlated with amplifications of MYCL1 [Gene ID=4610] in SCLC (small cell lung cancer) cell lines.coexpressionCOEXPkim_mycl1_amplification_targets_dn
img Genes negatively correlated with recurrence free survival in patients with hepatitis B-related (HBV) hepatocellular carcinoma (HCC).coexpressionCOEXPwoo_liver_cancer_recurrence_dn
img Genes negatively correlated with the asbestos exposure of lung cancer patients.coexpressionCOEXPwikman_asbestos_lung_cancer_dn
img Genes positively correlated with amplifications of MYCN [Gene ID=4613] in the SCLC (small cell lung cancer) cell lines.coexpressionCOEXPkim_mycn_amplification_targets_up
img Genes positively correlated with amplifications of MYC [Gene ID=4609] in SCLC (small cell lung cancer) cell lines.coexpressionCOEXPkim_myc_amplification_targets_up
img Genes positively correlated with amplifications of MYCL1 [Gene ID=4610] in SCLC (small cell lung cancer) cell lines.coexpressionCOEXPkim_mycl1_amplification_targets_up
img Genes positively correlated with recurrence free survival in patients with hepatitis B-related (HBV) hepatocellular carcinoma (HCC).coexpressionCOEXPwoo_liver_cancer_recurrence_up
img Genes positively correlated with the asbestos exposure of lung cancer patients.coexpressionCOEXPwikman_asbestos_lung_cancer_up
img Genes predicting sensitivity to cytoxan [PubChem=2907].coexpressionCOEXPpotti_cytoxan_sensitivity
img Genes predicting the choriocarcinoma (CC) of nonseminomatous male germ cell tumors (NSGCT).coexpressionCOEXPkorkola_choriocarcinoma
img Genes predicting the embryonic carcinoma (EC) subtype of nonseminomatous male germ cell tumors (NSGCT).coexpressionCOEXPkorkola_embryonal_carcinoma
img Genes predicting the teratoma (T) subtype of nonseminomatous male germ cell tumors (NSGCT).coexpressionCOEXPkorkola_teratoma
img Genes predicting the yolk sac tumor (YS) subtype of nonseminomatous male germ cell tumors (NSGCT).coexpressionCOEXPkorkola_yolk_sac_tumor
img Genes prefentially expressed in human inner ear tissue (cochlea and vestibule), at least 10-fold higher from a mixture of 29 other tissues.coexpressionCOEXPabe_inner_ear
img Genes preferentially down-regulated in MCF-7 cells (breast cancer) by tamoxifen [PubChem=5376] but not by estradiol or fulvestrant (ICI 182780) [PubChem=5757, 3478439].coexpressionCOEXPfrasor_tamoxifen_response_dn
img Genes preferentially up-regulated in MCF-7 cells (breast cancer) by tamoxifen [PubChem=5376] but not by estradiol or fulvestrant (ICI 182780) [PubChem=5757, 3478439].coexpressionCOEXPfrasor_tamoxifen_response_up
img Genes present but differentially expressed between Hep3B cells (hepatocellular carcinoma, HCC) with RNAi knockdown of SDHB [Gene ID=6390] and control cells.coexpressionCOEXPcervera_sdhb_targets_2
img Genes rapidly up-regulated in breast cancer cell cultures by estradiol [PubChem=5757].coexpressionCOEXPmassarweh_response_to_estradiol
img Genes regulated by ESR1 [Gene ID=2099] in MCF-7 cells (breast cancer).coexpressionCOEXPstein_esr1_targets
img Genes regulated by ESRRA [Gene ID=2101] in MCF-7 cells (breast cancer).coexpressionCOEXPstein_esrra_targets
img Genes regulated by forced expression of MYC [Gene ID=4609] in 293T (transformed fetal renal cell).coexpressionCOEXPcoller_myc_targets_dn
img Genes regulated by forced expression of MYC [Gene ID=4609] in 293T (transformed fetal renal cell).coexpressionCOEXPcoller_myc_targets_up
img Genes regulated by hypoxia, based on literature searches.coexpressionCOEXPwinter_hypoxia_metagene
img Genes required for CTNNB1 [Gene ID=1499] activity in DLD-1 cell (colon cancer with APC [Gene ID=324] deletions), based on shRNA screen.coexpressionCOEXPfirestein_ctnnb1_pathway
img Genes required for both proliferation and CTNNB1 [Gene ID=1499] activity in DLD-1 cell (colon cancer with APC [Gene ID=324] deletions).coexpressionCOEXPfirestein_ctnnb1_pathway_and_proliferation
img Genes required for proliferation of DLD-1 cell (colon cancer with APC [Gene ID=324] deletions), based on shRNA screen.coexpressionCOEXPfirestein_proliferation