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Details
Link-It Detail - Jax Mouse Phenotype - abnormal agouti pigmentation
Debug Stats
  • ### Total Build Time: 104 ms 17.166 KB
  • CONCEPT_NAME gt=4 ms Completed: 4 ms rowSize= 384 bytes
  • CONCEPT_SOLR_HIT_STATS gt=0 Completed: 0 ms rowSize= 14 bytes
  • CONCEPT_DEFINITION gt=0 Completed: 0 ms rowSize= 396 bytes
  • Skipping details on: CONCEPT_SYNONYM gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • Skipping details on: CONCEPT_TEXT gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_SEMANTIC_TYPE gt=41 ms Completed: 41 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_NAMESPACE gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_PARENTS gt=9 ms Completed: 9 ms rowSize= 586 bytes
  • CONCEPT_CHILDREN gt=9 ms Completed: 9 ms rowSize= 1.006 KB
  • CONCEPT_ANCESTRAL_ROOTS gt=0 Completed: 0 ms rowSize= 2.914 KB
  • CONCEPT_RELATIONSHIPS gt=2 ms Completed: 2 ms rowSize= 106 bytes
  • CONCEPT_GENES gt=37 ms Completed: 37 ms rowSize= 10.602 KB
  • CONCEPT_XREFS gt=1 ms Completed: 1 ms rowSize= 1.166 KB
  • CONCEPT_ANCILLARY gt=1 ms Completed: 1 ms rowSize= 14 bytes
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Jax Mouse Phenotype (1)
abnormal agouti pigmentation MP:0012076
Definition (1)
amount and distribution of yellow pigment (phaeomelanin) relative to black or brown pigment (eumelanin) is variably increased or decreased compared with a wild-type agouti pattern resulting in a range of coat color from yellow to almost black
Parents (1)
img abnormal coat/hair pigmentation MP:0002075
Children (2)
img darkened coat color MP:0005409
img yellow coat color MP:0003136
Ancestral Roots
RootRoot Plus OneDepthParent
img mammalian phenotype MP:0000001img integument phenotype MP:00107717img abnormal coat/hair pigmentation MP:0002075
img mammalian phenotype MP:0000001img pigmentation phenotype MP:00011864img abnormal coat/hair pigmentation MP:0002075
Genes (22)

Species:
human : 22
SpeciesGeneGeneIdGene NameEvidence
HumanITCH83737itchy E3 ubiquitin protein ligase
INFERRED
HumanADAMTS2080070ADAM metallopeptidase with thrombospondin type 1 motif, 20
INFERRED
HumanSOX1854345SRY (sex determining region Y)-box 18
INFERRED
HumanSMCHD123347structural maintenance of chromosomes flexible hinge domain containing 1
INFERRED
HumanMGRN123295mahogunin ring finger 1, E3 ubiquitin protein ligase
INFERRED
HumanEDAR10913ectodysplasin A receptor
INFERRED
HumanATRN8455attractin
INFERRED
HumanZBTB177709zinc finger and BTB domain containing 17
INFERRED
HumanTP537157tumor protein p53
INFERRED
HumanSOX26657SRY (sex determining region Y)-box 2
INFERRED
HumanPOMC5443proopiomelanocortin
INFERRED
HumanOCA24948oculocutaneous albinism II
INFERRED
HumanMITF4286microphthalmia-associated transcription factor
INFERRED
HumanMC1R4157melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)
INFERRED
HumanGNAQ2776guanine nucleotide binding protein (G protein), q polypeptide
INFERRED
HumanGNA112767guanine nucleotide binding protein (G protein), alpha 11 (Gq class)
INFERRED
HumanEDNRB1910endothelin receptor type B
INFERRED
HumanEDA1896ectodysplasin A
INFERRED
HumanDRD21813dopamine receptor D2
INFERRED
HumanCUX11523cut-like homeobox 1
INFERRED
HumanCBL867Cbl proto-oncogene, E3 ubiquitin protein ligase
INFERRED
HumanASIP434agouti signaling protein
INFERRED
XRefs (1)

XRef Types:
mp : 1


ToppGene Datasets:
none : 1
ToppGene DatasetsXRef TypeXRef IdXRefValuesSourceTop % Rank
MPimg MP:0012076abnormal agouti pigmentation0self