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Details
Link-It Detail - Jax Mouse Phenotype - abnormal base-excision repair
Debug Stats
  • ### Total Build Time: 60 ms 45.241 KB
  • CONCEPT_NAME gt=4 ms Completed: 4 ms rowSize= 386 bytes
  • CONCEPT_SOLR_HIT_STATS gt=0 Completed: 0 ms rowSize= 14 bytes
  • CONCEPT_DEFINITION gt=0 Completed: 0 ms rowSize= 406 bytes
  • CONCEPT_SYNONYM gt=0 Completed: 0 ms rowSize= 170 bytes
  • Skipping details on: CONCEPT_TEXT gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_SEMANTIC_TYPE gt=2 ms Completed: 2 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_NAMESPACE gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_PARENTS gt=11 ms Completed: 11 ms rowSize= 574 bytes
  • CONCEPT_CHILDREN gt=0 Completed: 0 ms rowSize= 8 bytes
  • CONCEPT_ANCESTRAL_ROOTS gt=10 ms Completed: 10 ms rowSize= 2.898 KB
  • CONCEPT_RELATIONSHIPS gt=1 ms Completed: 1 ms rowSize= 106 bytes
  • CONCEPT_GENES gt=29 ms Completed: 29 ms rowSize= 39.523 KB
  • CONCEPT_XREFS gt=2 ms Completed: 2 ms rowSize= 1.167 KB
  • CONCEPT_ANCILLARY gt=1 ms Completed: 1 ms rowSize= 14 bytes
  • Reload Stats
Jax Mouse Phenotype (1)
abnormal base-excision repair MP:0009796
Definition (1)
any anomaly in the process whereby an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate; the small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase
Synonyms (1)
"abnormal BER" EXACT
Parents (1)
img abnormal DNA repair MP:0008058
Ancestral Roots
RootRoot Plus OneDepthParent
img mammalian phenotype MP:0000001img homeostasis/metabolism phenotype MP:00053765img abnormal DNA repair MP:0008058
img mammalian phenotype MP:0000001img cellular phenotype MP:00053845img abnormal DNA repair MP:0008058
Genes (7)

Species:
human : 7
SpeciesGeneGeneIdGene NameEvidence
HumanPOLL27343polymerase (DNA directed), lambda
img Jax MP, Pubmed Id: 15917306, MOUSE PHENOTYPE ID: MGI:107799
img Jax MP, Pubmed Id: 22493258, MOUSE PHENOTYPE ID: MGI:97740
img Jax MP, Pubmed Id: 7675085, MOUSE PHENOTYPE ID: MGI:99135
img Jax MP, Pubmed Id: 15749700, MOUSE PHENOTYPE ID: MGI:1889000
img Jax MP, Pubmed Id: 17326724, MOUSE PHENOTYPE ID: MGI:1100494
img Jax MP, Pubmed Id: 20975950, MOUSE PHENOTYPE ID: MGI:2682328
img Jax MP, Pubmed Id: 17326724, MOUSE PHENOTYPE ID: MGI:103557
HumanATMIN23300ATM interactor
img Jax MP, Pubmed Id: 22493258, MOUSE PHENOTYPE ID: MGI:97740
img Jax MP, Pubmed Id: 17326724, MOUSE PHENOTYPE ID: MGI:1100494
img Jax MP, Pubmed Id: 15749700, MOUSE PHENOTYPE ID: MGI:1889000
img Jax MP, Pubmed Id: 15917306, MOUSE PHENOTYPE ID: MGI:107799
img Jax MP, Pubmed Id: 7675085, MOUSE PHENOTYPE ID: MGI:99135
img Jax MP, Pubmed Id: 20975950, MOUSE PHENOTYPE ID: MGI:2682328
img Jax MP, Pubmed Id: 17326724, MOUSE PHENOTYPE ID: MGI:103557
HumanXPC7508xeroderma pigmentosum, complementation group C
img Jax MP, Pubmed Id: 17326724, MOUSE PHENOTYPE ID: MGI:103557
img Jax MP, Pubmed Id: 17326724, MOUSE PHENOTYPE ID: MGI:1100494
img Jax MP, Pubmed Id: 20975950, MOUSE PHENOTYPE ID: MGI:2682328
img Jax MP, Pubmed Id: 15917306, MOUSE PHENOTYPE ID: MGI:107799
img Jax MP, Pubmed Id: 22493258, MOUSE PHENOTYPE ID: MGI:97740
img Jax MP, Pubmed Id: 15749700, MOUSE PHENOTYPE ID: MGI:1889000
img Jax MP, Pubmed Id: 7675085, MOUSE PHENOTYPE ID: MGI:99135
HumanXPA7507xeroderma pigmentosum, complementation group A
img Jax MP, Pubmed Id: 7675085, MOUSE PHENOTYPE ID: MGI:99135
img Jax MP, Pubmed Id: 20975950, MOUSE PHENOTYPE ID: MGI:2682328
img Jax MP, Pubmed Id: 22493258, MOUSE PHENOTYPE ID: MGI:97740
img Jax MP, Pubmed Id: 17326724, MOUSE PHENOTYPE ID: MGI:103557
img Jax MP, Pubmed Id: 15917306, MOUSE PHENOTYPE ID: MGI:107799
img Jax MP, Pubmed Id: 15749700, MOUSE PHENOTYPE ID: MGI:1889000
img Jax MP, Pubmed Id: 17326724, MOUSE PHENOTYPE ID: MGI:1100494
HumanPOLB5423polymerase (DNA directed), beta
img Jax MP, Pubmed Id: 20975950, MOUSE PHENOTYPE ID: MGI:2682328
img Jax MP, Pubmed Id: 15749700, MOUSE PHENOTYPE ID: MGI:1889000
img Jax MP, Pubmed Id: 17326724, MOUSE PHENOTYPE ID: MGI:1100494
img Jax MP, Pubmed Id: 22493258, MOUSE PHENOTYPE ID: MGI:97740
img Jax MP, Pubmed Id: 7675085, MOUSE PHENOTYPE ID: MGI:99135
img Jax MP, Pubmed Id: 17326724, MOUSE PHENOTYPE ID: MGI:103557
img Jax MP, Pubmed Id: 15917306, MOUSE PHENOTYPE ID: MGI:107799
HumanERCC62074excision repair cross-complementing rodent repair deficiency, complementation group 6
img Jax MP, Pubmed Id: 15749700, MOUSE PHENOTYPE ID: MGI:1889000
img Jax MP, Pubmed Id: 17326724, MOUSE PHENOTYPE ID: MGI:1100494
img Jax MP, Pubmed Id: 22493258, MOUSE PHENOTYPE ID: MGI:97740
img Jax MP, Pubmed Id: 7675085, MOUSE PHENOTYPE ID: MGI:99135
img Jax MP, Pubmed Id: 20975950, MOUSE PHENOTYPE ID: MGI:2682328
img Jax MP, Pubmed Id: 17326724, MOUSE PHENOTYPE ID: MGI:103557
img Jax MP, Pubmed Id: 15917306, MOUSE PHENOTYPE ID: MGI:107799
HumanGADD45A1647growth arrest and DNA-damage-inducible, alpha
img Jax MP, Pubmed Id: 22493258, MOUSE PHENOTYPE ID: MGI:97740
img Jax MP, Pubmed Id: 7675085, MOUSE PHENOTYPE ID: MGI:99135
img Jax MP, Pubmed Id: 20975950, MOUSE PHENOTYPE ID: MGI:2682328
img Jax MP, Pubmed Id: 17326724, MOUSE PHENOTYPE ID: MGI:1100494
img Jax MP, Pubmed Id: 17326724, MOUSE PHENOTYPE ID: MGI:103557
img Jax MP, Pubmed Id: 15917306, MOUSE PHENOTYPE ID: MGI:107799
img Jax MP, Pubmed Id: 15749700, MOUSE PHENOTYPE ID: MGI:1889000
XRefs (1)

XRef Types:
mp : 1


ToppGene Datasets:
none : 1
ToppGene DatasetsXRef TypeXRef IdXRefValuesSourceTop % Rank
MPimg MP:0009796abnormal base-excision repair0self