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Details
Link-It Detail - Gene Ontology: Biological Processes - DNA-dependent transcription, initiation
Debug Stats
  • ### Total Build Time: 91 ms 51.023 KB
  • CONCEPT_NAME gt=1 ms Completed: 1 ms rowSize= 402 bytes
  • CONCEPT_SOLR_HIT_STATS gt=0 Completed: 0 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_DEFINITION gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • Skipping details on: CONCEPT_SYNONYM gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • Skipping details on: CONCEPT_TEXT gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
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  • CONCEPT_NAMESPACE gt=0 Completed: 0 ms rowSize= 170 bytes
  • CONCEPT_PARENTS gt=6 ms Completed: 6 ms rowSize= 972 bytes
  • CONCEPT_CHILDREN gt=8 ms Completed: 8 ms rowSize= 5.043 KB
  • CONCEPT_ANCESTRAL_ROOTS gt=1 ms Completed: 1 ms rowSize= 17.384 KB
  • CONCEPT_RELATIONSHIPS gt=1 ms Completed: 1 ms rowSize= 106 bytes
  • CONCEPT_GENES gt=72 ms Completed: 72 ms rowSize= 25.803 KB
  • CONCEPT_XREFS gt=1 ms Completed: 1 ms rowSize= 1.142 KB
  • CONCEPT_ANCILLARY gt=1 ms Completed: 1 ms rowSize= 14 bytes
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Gene Ontology: Biological Processes (1)
DNA-dependent transcription, initiation GO:0006352
Namespace (1)
biological_process
Parents (2)
img transcription, DNA-dependent GO:0006351
img RNA biosynthetic process GO:0032774
Children (11)
img transcription initiation from RNA polymerase III promoter GO:0006384
img transcription initiation from RNA polymerase I promoter GO:0006361
img DNA-dependent transcriptional start site selection GO:0001173
img transcription initiation from mitochondrial promoter GO:0006391
img DNA-dependent transcriptional open complex formation GO:0001112
img regulation of DNA-dependent transcription, initiation GO:2000142
img transcription initiation from bacterial-type RNA polymerase promoter GO:0001123
img negative regulation of DNA-dependent transcription, initiation GO:2000143
img positive regulation of DNA-dependent transcription, initiation GO:2000144
img transcription initiation from RNA polymerase II promoter GO:0006367
img DNA-dependent transcriptional preinitiation complex assembly GO:0070897
Ancestral Roots
RootRoot Plus OneDepthParent
img biological_process GO:0008150img metabolic process GO:00081527img transcription, DNA-dependent GO:0006351
img biological_process GO:0008150img cellular process GO:00099877img transcription, DNA-dependent GO:0006351
img biological_process GO:0008150img metabolic process GO:00081528img transcription, DNA-dependent GO:0006351
img biological_process GO:0008150img cellular process GO:000998710img transcription, DNA-dependent GO:0006351
img biological_process GO:0008150img metabolic process GO:000815210img transcription, DNA-dependent GO:0006351
img biological_process GO:0008150img metabolic process GO:00081529img transcription, DNA-dependent GO:0006351
img biological_process GO:0008150img cellular process GO:00099878img transcription, DNA-dependent GO:0006351
img biological_process GO:0008150img cellular process GO:00099879img transcription, DNA-dependent GO:0006351
img biological_process GO:0008150img cellular process GO:00099879img RNA biosynthetic process GO:0032774
img biological_process GO:0008150img metabolic process GO:00081529img RNA biosynthetic process GO:0032774
img biological_process GO:0008150img metabolic process GO:00081528img RNA biosynthetic process GO:0032774
img biological_process GO:0008150img cellular process GO:00099877img RNA biosynthetic process GO:0032774
img biological_process GO:0008150img metabolic process GO:00081527img RNA biosynthetic process GO:0032774
img biological_process GO:0008150img cellular process GO:00099878img RNA biosynthetic process GO:0032774
Genes (293)

Species:
human : 228
mouse : 65
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SpeciesGeneGeneIdGene NameEvidence
MouseTaf9b407786TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa
img GO IEA, Gene Ontology ID: GO:0006352
MouseMed13327987mediator complex subunit 13
MouseTaf2319944TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa
MouseTaf1270627TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa
img GO IEA, Gene Ontology ID: GO:0006352
MouseTbpl1237336TBP-like 1
img GO IEA, Gene Ontology ID: GO:0006352
MouseGtf2a2235459general transcription factor IIA, 2, 12kDa
MouseMed17234959mediator complex subunit 17
MouseRsf1233532remodeling and spacing factor 1
img GO ISO, Gene Ontology ID: GO:0006352
MouseThrap3230753thyroid hormone receptor associated protein 3
MouseGtf2b229906general transcription factor IIB
img GO IEA, Gene Ontology ID: GO:0006352
MouseTaf4a228980TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor
img GO ISO, Gene Ontology ID: GO:0006352
MouseTbpl2227606TATA box binding protein like 2
img GO IEA, Gene Ontology ID: GO:0006352
MouseTaf5226182TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa
img GO ISO, Gene Ontology ID: GO:0006352
MouseTaf6l225895TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa
img GO IEA, Gene Ontology ID: GO:0006352
MouseMed16216154mediator complex subunit 16
MouseTaf9108143TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa
img GO IEA, Gene Ontology ID: GO:0006352
MouseRrn3106298RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)
img GO IDA, Pubmed Id: 8413268, Gene Ontology ID: GO:0006352
MouseGtf2f198053general transcription factor IIF, polypeptide 1, 74kDa
MouseSmarca593762SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
img GO ISO, Gene Ontology ID: GO:0006352
MouseGtf2a183602general transcription factor IIA, 1, 19/37kDa
MouseRtf176246Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
img GO IEA, Gene Ontology ID: GO:0006352
MouseTaf7l74469TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa
MouseGtf2e174197general transcription factor IIE, polypeptide 1, alpha 56kDa
MouseBclaf172567BCL2-associated transcription factor 1
MouseCand171902cullin-associated and neddylation-dissociated 1
XRefs (1)

XRef Types:
go : 1


ToppGene Datasets:
none : 1
ToppGene DatasetsXRef TypeXRef IdXRefValuesSourceTop % Rank
GOimg GO:0006352DNA-dependent transcription, initiation0self