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Details
Link-It Detail - CoExpression Atlas - Cluster 5: ECM related genes up-regulated in dermal fibroblasts later than 30 min after TGFB1 [Gene ID=7040] addition; decreased slowly after the peak at 120 min time point.
Debug Stats
  • ### Total Build Time: 32 ms 17.037 KB
  • CONCEPT_NAME gt=1 ms Completed: 1 ms rowSize= 375 bytes
  • CONCEPT_SOLR_HIT_STATS gt=0 Completed: 0 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_DEFINITION gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • Skipping details on: CONCEPT_SYNONYM gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
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  • CONCEPT_SEMANTIC_TYPE gt=0 Completed: 0 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_NAMESPACE gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_PARENTS gt=13 ms Completed: 13 ms rowSize= 540 bytes
  • CONCEPT_CHILDREN gt=0 Completed: 0 ms rowSize= 8 bytes
  • CONCEPT_ANCESTRAL_ROOTS gt=0 Completed: 0 ms rowSize= 1.329 KB
  • CONCEPT_RELATIONSHIPS gt=1 ms Completed: 1 ms rowSize= 106 bytes
  • CONCEPT_GENES gt=16 ms Completed: 16 ms rowSize= 13.434 KB
  • CONCEPT_XREFS gt=1 ms Completed: 1 ms rowSize= 1.229 KB
  • CONCEPT_ANCILLARY gt=0 Completed: 0 ms rowSize= 14 bytes
  • Reload Stats
CoExpression Atlas (1)
Cluster 5: ECM related genes up-regulated in dermal fibroblasts later than 30 min after TGFB1 [Gene ID=7040] addition; decreased slowly after the peak at 120 min time point. verrecchia_response_to_tgfb1_c5
Parents (1)
img coexpressionatlas_verrecchia_response_to_tgfb1 verrecchia_response_to_tgfb1
Ancestral Roots
RootRoot Plus OneDepthParent
img coexpressionatlas_verrecchia verrecchiaimg coexpressionatlas_verrecchia_response verrecchia_response5img coexpressionatlas_verrecchia_response_to_tgfb1 verrecchia_response_to_tgfb1
Genes (20)

Species:
human : 20
SpeciesGeneGeneIdGene NameEvidence
HumanWNT8B7479wingless-type MMTV integration site family, member 8B
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c5
HumanTNFRSF1A7132tumor necrosis factor receptor superfamily, member 1A
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c5
HumanSMO6608smoothened, frizzled family receptor
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c5
HumanSEMA3F6405sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c5
HumanNME44833NME/NM23 nucleoside diphosphate kinase 4
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c5
HumanMMP114320matrix metallopeptidase 11 (stromelysin 3)
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c5
HumanMMP24313matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c5
HumanITGB83696integrin, beta 8
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c5
HumanITGB33690integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c5
HumanITGA53678integrin, alpha 5 (fibronectin receptor, alpha polypeptide)
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c5
HumanITGA43676integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c5
HumanILK3611integrin-linked kinase
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c5
HumanFGD12245FYVE, RhoGEF and PH domain containing 1
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c5
HumanEPHA21969EPH receptor A2
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c5
HumanEFNA51946ephrin-A5
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c5
HumanDVL31857dishevelled segment polarity protein 3
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c5
HumanCTNNB11499catenin (cadherin-associated protein), beta 1, 88kDa
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c5
HumanCTNNA11495catenin (cadherin-associated protein), alpha 1, 102kDa
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c5
HumanDDR1780discoidin domain receptor tyrosine kinase 1
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c5
HumanARHGAP1392Rho GTPase activating protein 1
MSigDB: C2.cgp, coexpatlas Id: verrecchia_response_to_tgfb1_c5
XRefs (1)

XRef Types:
coexpatlas : 1


ToppGene Datasets:
none : 1
ToppGene DatasetsXRef TypeXRef IdXRefValuesSourceTop % Rank
coexpatlasimg verrecchia_response_to_tgfb1_c5Cluster 5: ECM related genes up-regulated in dermal fibroblasts later than 30 min after TGFB1 [Gene ID=7040] addition; decreased slowly after the peak at 120 min time point.0self