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Details
Link-It Detail - CoExpression Atlas - Candidate genes in significant regions of chromosomal copy number losses in a panel of melanoma samples.
Debug Stats
  • ### Total Build Time: 68 ms 21.321 KB
  • CONCEPT_NAME gt=1 ms Completed: 1 ms rowSize= 302 bytes
  • CONCEPT_SOLR_HIT_STATS gt=0 Completed: 0 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_DEFINITION gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • Skipping details on: CONCEPT_SYNONYM gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • Skipping details on: CONCEPT_TEXT gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_SEMANTIC_TYPE gt=1 ms Completed: 1 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_NAMESPACE gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_PARENTS gt=6 ms Completed: 6 ms rowSize= 520 bytes
  • CONCEPT_CHILDREN gt=1 ms Completed: 1 ms rowSize= 8 bytes
  • CONCEPT_ANCESTRAL_ROOTS gt=16 ms Completed: 16 ms rowSize= 1.241 KB
  • CONCEPT_RELATIONSHIPS gt=1 ms Completed: 1 ms rowSize= 106 bytes
  • CONCEPT_GENES gt=40 ms Completed: 40 ms rowSize= 17.972 KB
  • CONCEPT_XREFS gt=1 ms Completed: 1 ms rowSize= 1.153 KB
  • CONCEPT_ANCILLARY gt=1 ms Completed: 1 ms rowSize= 14 bytes
  • Reload Stats
CoExpression Atlas (1)
Candidate genes in significant regions of chromosomal copy number losses in a panel of melanoma samples. lin_melanoma_copy_number_dn
Parents (1)
img coexpressionatlas_lin_melanoma_copy_number lin_melanoma_copy_number
Ancestral Roots
RootRoot Plus OneDepthParent
img coexpressionatlas_lin linimg coexpressionatlas_lin_melanoma lin_melanoma5img coexpressionatlas_lin_melanoma_copy_number lin_melanoma_copy_number
Genes (39)

Species:
human : 39
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Current 25
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Current 1
SpeciesGeneGeneIdGene NameEvidence
HumanPACRG135138PARK2 co-regulated
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
HumanATAD184896ATPase family, AAA domain containing 1
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
HumanELL380237elongation factor RNA polymerase II-like 3
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
HumanPROSER180209proline and serine rich 1
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
HumanRCBTB155213regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
HumanWWOX51741WW domain containing oxidoreductase
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
HumanCRYL151084crystallin, lambda 1
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
HumanALG529880ALG5, dolichyl-phosphate beta-glucosyltransferase
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
HumanMED429079mediator complex subunit 4
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
HumanNUFIP126747nuclear fragile X mental retardation protein interacting protein 1
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
HumanSPG2023111spastic paraplegia 20 (Troyer syndrome)
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
HumanMYCBP223077MYC binding protein 2, E3 ubiquitin protein ligase
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
HumanFNDC3A22862fibronectin type III domain containing 3A
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
HumanTXNL4A10907thioredoxin-like 4A
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
HumanPITRM110531pitrilysin metallopeptidase 1
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
HumanSAP1810284Sin3A-associated protein, 18kDa
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
HumanSERF210169small EDRK-rich factor 2
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
HumanC14orf29556chromosome 14 open reading frame 2
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
HumanBAG59529BCL2-associated athanogene 5
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
HumanMTMR69107myotubularin related protein 6
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
HumanPAPSS290603'-phosphoadenosine 5'-phosphosulfate synthase 2
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
HumanSUCLA28803succinate-CoA ligase, ADP-forming, beta subunit
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
HumanTPT17178tumor protein, translationally-controlled 1
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
HumanRPL216144ribosomal protein L21
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
HumanRNF66049ring finger protein (C3H2C3 type) 6
MSigDB: C2.cgp, coexpatlas Id: lin_melanoma_copy_number_dn
XRefs (1)

XRef Types:
coexpatlas : 1


ToppGene Datasets:
none : 1
ToppGene DatasetsXRef TypeXRef IdXRefValuesSourceTop % Rank
coexpatlasimg lin_melanoma_copy_number_dnCandidate genes in significant regions of chromosomal copy number losses in a panel of melanoma samples.0self