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Details
Link-It Detail - CoExpression Atlas - Cluster 6: selected luminal genes clustered together across breast cancer samples.
Debug Stats
  • ### Total Build Time: 73 ms 14.043 KB
  • CONCEPT_NAME gt=1 ms Completed: 1 ms rowSize= 283 bytes
  • CONCEPT_SOLR_HIT_STATS gt=0 Completed: 0 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_DEFINITION gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • Skipping details on: CONCEPT_SYNONYM gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • Skipping details on: CONCEPT_TEXT gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_SEMANTIC_TYPE gt=1 ms Completed: 1 ms rowSize= 14 bytes
  • Skipping details on: CONCEPT_NAMESPACE gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_PARENTS gt=14 ms Completed: 14 ms rowSize= 540 bytes
  • CONCEPT_CHILDREN gt=0 Completed: 0 ms rowSize= 8 bytes
  • CONCEPT_ANCESTRAL_ROOTS gt=28 ms Completed: 28 ms rowSize= 1.280 KB
  • CONCEPT_RELATIONSHIPS gt=1 ms Completed: 1 ms rowSize= 106 bytes
  • CONCEPT_GENES gt=26 ms Completed: 26 ms rowSize= 10.669 KB
  • CONCEPT_XREFS gt=1 ms Completed: 1 ms rowSize= 1.138 KB
  • CONCEPT_ANCILLARY gt=1 ms Completed: 1 ms rowSize= 14 bytes
  • Reload Stats
CoExpression Atlas (1)
Cluster 6: selected luminal genes clustered together across breast cancer samples. farmer_breast_cancer_cluster_6
Parents (1)
img coexpressionatlas_farmer_breast_cancer_cluster farmer_breast_cancer_cluster
Ancestral Roots
RootRoot Plus OneDepthParent
img coexpressionatlas_farmer farmerimg coexpressionatlas_farmer_breast farmer_breast5img coexpressionatlas_farmer_breast_cancer_cluster farmer_breast_cancer_cluster
Genes (16)

Species:
human : 16
SpeciesGeneGeneIdGene NameEvidence
HumanFTSJ3117246FtsJ homolog 3 (E. coli)
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_6
HumanDHX4079665DEAH (Asp-Glu-Ala-His) box polypeptide 40
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_6
HumanRNF4354894ring finger protein 43
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_6
HumanTACO151204translational activator of mitochondrially encoded cytochrome c oxidase I
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_6
HumanTUBD151174tubulin, delta 1
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_6
HumanPOLG211232polymerase (DNA directed), gamma 2, accessory subunit
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_6
HumanDCAF710238DDB1 and CUL4 associated factor 7
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_6
HumanMED139969mediator complex subunit 13
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_6
HumanMTMR49110myotubularin related protein 4
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_6
HumanPPM1D8493protein phosphatase, Mg2+/Mn2+ dependent, 1D
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_6
HumanSUPT4H16827suppressor of Ty 4 homolog 1 (S. cerevisiae)
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_6
HumanSMARCD26603SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_6
HumanRPS6KB16198ribosomal protein S6 kinase, 70kDa, polypeptide 1
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_6
HumanRAD51C5889RAD51 paralog C
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_6
HumanTRIM374591tripartite motif containing 37
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_6
HumanCYB5611534cytochrome b561
MSigDB: C2.cgp, coexpatlas Id: farmer_breast_cancer_cluster_6
XRefs (1)

XRef Types:
coexpatlas : 1


ToppGene Datasets:
none : 1
ToppGene DatasetsXRef TypeXRef IdXRefValuesSourceTop % Rank
coexpatlasimg farmer_breast_cancer_cluster_6Cluster 6: selected luminal genes clustered together across breast cancer samples.0self