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GATACA
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Details
Link-It Detail - Anatomy - Extracellular Matrix
Debug Stats
  • ### Total Build Time: 798 ms 40.971 KB
  • CONCEPT_NAME gt=13 ms Completed: 13 ms rowSize= 338 bytes
  • CONCEPT_SOLR_HIT_STATS gt=0 Completed: 0 ms rowSize= 14 bytes
  • CONCEPT_DEFINITION gt=0 Completed: 0 ms rowSize= 233 bytes
  • Skipping details on: CONCEPT_SYNONYM gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • Skipping details on: CONCEPT_TEXT gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_SEMANTIC_TYPE gt=1 ms Completed: 1 ms rowSize= 175 bytes
  • Skipping details on: CONCEPT_NAMESPACE gt=NONE 0 Completed: 0 ms rowSize= 0 bytes
  • CONCEPT_PARENTS gt=10 ms Completed: 10 ms rowSize= 1.399 KB
  • CONCEPT_CHILDREN gt=7 ms Completed: 7 ms rowSize= 998 bytes
  • CONCEPT_ANCESTRAL_ROOTS gt=8 ms Completed: 8 ms rowSize= 3.659 KB
  • CONCEPT_RELATIONSHIPS gt=412 ms Completed: 412 ms rowSize= 15.023 KB
  • CONCEPT_GENES gt=341 ms Completed: 341 ms rowSize= 18.004 KB
  • CONCEPT_XREFS gt=5 ms Completed: 5 ms rowSize= 1.154 KB
  • CONCEPT_ANCILLARY gt=1 ms Completed: 1 ms rowSize= 14 bytes
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Anatomy (1)
Extracellular Matrix C0015350
Definition (1)
Body substance which consists of ground substance and connective tissue fibers.
Semantic Types (1)
Tissue (T024)
Parents (3)
img cellular component C1166607
img Extracellular Space C0015352
img Extracellular Structure C1517053
Children (2)
img Zona Pellucida C0043519
img Glomerular Basement Membrane C0599297
Ancestral Roots
RootRoot Plus OneDepthParent
img cellular component C11666072img cellular component C1166607
img cellular component C1166607img extracellular region part C18200314img Extracellular Space C0015352
img Normal Tissue Part C1519525img Extracellular Structure C15170533img Extracellular Structure C1517053
Relationships (298)

Relation Types:
anat_​to_​anat : 132
anat_​to_​chem : 106
anat_​to_​diso : 18
anat_​to_​phen : 3
anat_​to_​phys : 39


Relationships:
none : 198
anatomic_​structure_​is_​physical_​part_​of : 5
gene_​product_​has_​associated_​anatomy : 39
has_​physical_​part_​of_​anatomic_​structure : 1
isa : 21
part_​of : 3
permuted_​term_​of : 1
sib_​in_​isa : 15
sib_​in_​part_​of : 12
use : 3
Page Size
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Relation TypeCo-Occuring
Concept Count
RelationshipConcept
ANAT_to_PHYS566img physiological aspects C0031843
ANAT_to_PHYS561img physiological aspects C0031843
ANAT_to_ANAT200img Fibroblasts C0016030
ANAT_to_CHEM192img Collagen C0009325
ANAT_to_PHEN172img genetic aspects C0017399
ANAT_to_CHEM160img Extracellular Matrix Protein C0079323
ANAT_to_CHEM160img Extracellular Matrix Proteins C0079323
ANAT_to_CHEM156img Scaffold, Tissue C0597587
ANAT_to_ANAT142img Chondrocyte C0225369
ANAT_to_ANAT139img Fibroblasts C0016030
ANAT_to_CHEM129img Collagen C0009325
ANAT_to_PHYS126img Signal Transduction C0037083
ANAT_to_CHEM122img Extracellular Matrix Protein C0079323
ANAT_to_PHYS113img Cell Movement C1621968
ANAT_to_CHEM110img Biocompatible Materials C0005479
ANAT_to_PHYS106img Cell Differentiation C0007589
ANAT_to_ANAT102img Chondrocytes C0225369
ANAT_to_CHEM95img Transforming Growth Factor beta C0040690
ANAT_to_PHEN91img genetic aspects C0017399
ANAT_to_PHYS85img Cell Adhesion C0007577
ANAT_to_PHYS82img Adhesion, Cell C0007577
ANAT_to_DISO81img Neoplasms C0027651
ANAT_to_CHEM80img MMPs C0623362
ANAT_to_ANAT79img Stem Cells C0038250
ANAT_to_ANAT78img Cartilage, Articular C0007303
Genes (6242)

Species:
human : 5530
mouse : 712
Page Size
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SpeciesGeneGeneIdGene NameEvidence
MouseTBC1D3B414059TBC1 domain family, member 3B
MouseNPNT255743nephronectin
MouseHIST1H2AA221613histone cluster 1, H2aa
MouseHIPK1204851homeodomain interacting protein kinase 1
MouseCADM4199731cell adhesion molecule 4
MousePAOX196743polyamine oxidase (exo-N4-amino)
MouseZNF384171017zinc finger protein 384
MouseASB8140461ankyrin repeat and SOCS box containing 8
MouseJDP2122953Jun dimerization protein 2
MouseHIST4H4121504histone cluster 4, H4
MouseSP7121340Sp7 transcription factor
MouseDCD117159dermcidin
MouseTNFRSF13C115650tumor necrosis factor receptor superfamily, member 13C
MouseSAT2112483spermidine/spermine N1-acetyltransferase family member 2
MouseEGLN2112398egl-9 family hypoxia-inducible factor 2
MouseHS6ST290161heparan sulfate 6-O-sulfotransferase 2
MousePSRC184722proline/serine-rich coiled-coil 1
MouseBEX284707brain expressed X-linked 2
MouseTBC1D3F84218TBC1 domain family, member 3F
MouseANTXR184168anthrax toxin receptor 1
MouseSOX783595SRY (sex determining region Y)-box 7
MouseZBP181030Z-DNA binding protein 1
MouseCD27680381CD276 molecule
MousePDCD1LG280380programmed cell death 1 ligand 2
MouseMUS8180198MUS81 structure-specific endonuclease subunit
XRefs (1)

XRef Types:
cui : 1


ToppGene Datasets:
none : 1
ToppGene DatasetsXRef TypeXRef IdXRefValuesSourceTop % Rank
CUIimg C0015350Extracellular Matrix0self